Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0549 ATGGGTAAGTACCTTCTGTTACGGGCTCTCACTCTCCTCAACCTCGTACTATTCTCCACCCTTCATGTCTCAGCTGCCCCTTCAACTACTTCTCCTGCAAAAATTGTTAGTGGGTTTCTCTCCAATGCCGTGCCTGCCGTCACCAAGTGGGTGTGGTCGCTCAAGGCCACCACCAAAGCGGCGGTTTCGAGCAGGTCGATGATGAAGTTCGAGGGTGGATTCAGTGTGGAGACTGTGTTTGATGGGAGCAAGCTTGGGATCGAGCCTTATGCTGTAGAGGTGTTGCCCAGTGGGGAGCTTCTCATTCTTGATTCGGCTAATAGTAACATTTATAGGATTTCCTCCTCGCTTTCTTTGTACAGCAGGCCCAAGCTGGTTGCAGGGTCAGCTGAAGGGTATTCTGGACATATTGATGGGAAGCTCAGGGAGGCCAGGATGAACCACCCTAAGGGGATAACTGTTGACGACCGAGGAAATATCTATGTTGCAGATACTACGAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACGACAATTGCGGGAGGAAAATGGAGCCGGGGAGGGGGGCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCACTACTCGTCATAGACAGAGGAAACCGAGCCATCAGGGAGATCCAACTCCACTTTGATGATTGTGCCTATCAATATGGCAGTGGATTCCCACTTGGGATTGCAATGCTAGTTGGGGCTGGCTTCTTTGGTTACATGCTGGCATTATTGCAGCGAAGGCTTTGTACAATTGTAGCATCCCAGGACGCTCAGGTTCCAATAATAACATCTTCGGTTCCTCCAAGTTCATATCAAAAGCCCTTGAAATCTGTCAGGCCTCCTTTAATTCCAGCAGAATATGAACCTGACAAGCAGGAAGAAGGCTTCTTTGGATCCCTCGGGAAGCTTCTTGCAAATGCCGGTGCATCAATGGTGGAGATAATGGGAGGATTATTTCCTTCTTTCAGAAGAAAATCGCTAAGCCACCAATTTCAAAGACAACCACTTCTCCAGCAACCTCAGAAGCAAGCAAATGTTTGGCCTGTGCAGGAAAGTTTCGTGATCCCTGATGAAGACGAACCTCCTTCGATTGACACAAGAGCTCCAACCCCTAGAAAAACCTATCCTTTCATGTCCAAGGATGCAGAGAAAATGCAACAACTGCAGCAAAGTCGTGCATTCTATAGTGGATGGGATGGAGATCTCAATCAGCAGCAGCAGAAGCACCATCATCGCCAACAGTACCGATCGGCAACCCCTCACACTTACTATGAGCAGAGCCATGAGACAACCAATGAGATAGTGTTTGGGGCAGTTCAAGAACAGGATAGGAGGCAGGAATATGTGGTTATCAAGCCTGTGAATTATGGGGAGTCACTGTATGACACTCCCAATCACAATGTTAGGTCCAGAATGAGTTTCATGGGCTATGGCCACAGGTATTGA 1509 0.4751 MGKYLLLRALTLLNLVLFSTLHVSAAPSTTSPAKIVSGFLSNAVPAVTKWVWSLKATTKAAVSSRSMMKFEGGFSVETVFDGSKLGIEPYAVEVLPSGELLILDSANSNIYRISSSLSLYSRPKLVAGSAEGYSGHIDGKLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLCTIVASQDAQVPIITSSVPPSSYQKPLKSVRPPLIPAEYEPDKQEEGFFGSLGKLLANAGASMVEIMGGLFPSFRRKSLSHQFQRQPLLQQPQKQANVWPVQESFVIPDEDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLQQSRAFYSGWDGDLNQQQQKHHHRQQYRSATPHTYYEQSHETTNEIVFGAVQEQDRRQEYVVIKPVNYGESLYDTPNHNVRSRMSFMGYGHRY* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0549 502 PANTHER - 1 502 - -
Pvu3g0549 502 MobiDBLite consensus disorder prediction 374 395 - -
Pvu3g0549 502 PANTHER NHL REPEAT PROTEIN 1 502 - -
Pvu3g0549 502 SUPERFAMILY NHL repeat 76 233 - -
Pvu3g0549 502 Pfam NHL repeat 147 172 IPR001258 GO:0005515
Pvu3g0549 502 Gene3D - 43 231 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0549 Pvu-Chr3 6670113 6674050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0549 - - gmx:100781836 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0549 3 6670113 6674050 Pvu3g0549 3 6670113 6674050 ECH