Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0540 ATGGAGGAGCAGCGACAACAACCACAGGTTCTTCTCTCCATTGACTGGAACCGACAACTTCAACATGACTCGCCGCCGCGGGAGGTGGTCATAGTGTCTTCCTCCGCCATGGCTTCTGATCAGGACGACCTCAATGCTATTCCCGATCACAAGCTCAAGGAGTCGATTCAGAGCAAGAAGAGAACACTCGAAGCTACCGGCAAGAATTTACCCGACAATGGCGCCAAGCTTCGCGCTACCATCGACCGCTACCAACAGGAACTTAGTCGCCGGGAATCCACGCGGCTTCGTCAGGAAGTTGATGAGGACAATAAGCCGCTGTCCGAACAAACTACGAGCTCAAGTGCTGTTGTTACCAAGGGTGTGTCTAATGATTTGAGAGAAGGGACTCTGTCATCTCATGCTCAGCCACTATCCACTTTTACATCTTACTTTGTTAAAAAAATGGAAGATAGTACTAGTTGTACAACTGGCAGTGCATTTAAAAAAGAGAACCAGAAAATACATGAAAATGCTGCTTCTGGTGCATTTGAAAAAGAGTCACATTTCAAACATTGTGACAACCAGAAAATACCAGACAATGGAGCCCCTAGAAGAAGAAAGCGACATCGTTCATCATCAAGACAATTGCCGTTTCGGTGTCCTAGTAAACTTTCTAAACATGATACTTTCAGTGATGGTAAAACTTGTAGAGCAACATCCACTTTTTCTCTGCGGAATATTGGGAGAAATCTGTCAAGATGCTACCCAAAAGAGAAGGTTGCTTCTCAGGCAATTCAATTAGATGGCTCAAGGTCCAGAAAGGGTCAGCCCATTGTTCTTGATATTGACGACGACGATGATGAGGCTCATATTGTGGAGAAAACCGAAAACCAATATGCTGAATACCTGAAAGAAGCTAAGATCTATTTTCCATCAAGAGATGATCCAGAGTGTGTAGAAATTTGTTACAAAGACACAGATTGCCTTGCCCCTGAAGGCTATTTAACATCAACAATAATGAACTTTTACATTCAATATTTGCAGCGGCAAGTATTGTTGACAACCGACTACCATTTTTTCAATACATATTTCTACAAGAAGCTTAAAGAAGCTGTTTCGTACAAGCAAAGTGATAGAGATGTGATCTTTGCAAAGTTCAGAAGATGGTGGAAGGGTGTAAATATTTTTCAGAAGGCGTATGTTTTGATTCCAATACACGAGGACCTTCACTGGAGCTTGGTCATTATTTGTATCCCAGATAAAGAAGATGAATCGGGGCCAATCTTACTTCATTTGGATTCTTTGGGTCTTCACTCTAGTAAATCAGTTTTTGATAATATTAAAAGCTATTTGATTGAAGAAAAGAACTATATGGATCGGGAGGATGTGTCTTCAGATGTTTCAATTGCGGACAGAATATGGAAGTGCCTTCCTCGTAGAATTGAATGTCATATCATTACGGTTCCCCAACAGAAGAATGAGTATGACTGTGGTCTTTTTGTATTGTACTTCATTGAGCGTTTCATGGAAGAAGCACCTGAGAGACTGAAAAAGGAAGATTTGGCAATGTTTGGAAAGCGATGGTTCAAACCAGAACAGGCATCCAATTTGAGAATGAAAATCCGTAAATTGCTTGTAGAAAAATTACAGAATTCAATGAGGGATAATTGTGAGTTAGAATCTTCTCCTTCATCTTCTGCCTGCCCTGCAACTCATTCTGTTGAGTCCGCCAAGGATTCTATGGCGTAA 1731 0.4154 MEEQRQQPQVLLSIDWNRQLQHDSPPREVVIVSSSAMASDQDDLNAIPDHKLKESIQSKKRTLEATGKNLPDNGAKLRATIDRYQQELSRRESTRLRQEVDEDNKPLSEQTTSSSAVVTKGVSNDLREGTLSSHAQPLSTFTSYFVKKMEDSTSCTTGSAFKKENQKIHENAASGAFEKESHFKHCDNQKIPDNGAPRRRKRHRSSSRQLPFRCPSKLSKHDTFSDGKTCRATSTFSLRNIGRNLSRCYPKEKVASQAIQLDGSRSRKGQPIVLDIDDDDDEAHIVEKTENQYAEYLKEAKIYFPSRDDPECVEICYKDTDCLAPEGYLTSTIMNFYIQYLQRQVLLTTDYHFFNTYFYKKLKEAVSYKQSDRDVIFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLVIICIPDKEDESGPILLHLDSLGLHSSKSVFDNIKSYLIEEKNYMDREDVSSDVSIADRIWKCLPRRIECHIITVPQQKNEYDCGLFVLYFIERFMEEAPERLKKEDLAMFGKRWFKPEQASNLRMKIRKLLVEKLQNSMRDNCELESSPSSSACPATHSVESAKDSMA* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0540 576 MobiDBLite consensus disorder prediction 178 195 - -
Pvu3g0540 576 PANTHER UBIQUITIN-LIKE PROTEASE 4 42 560 - -
Pvu3g0540 576 ProSiteProfiles Ubiquitin-like protease family profile. 313 502 IPR003653 GO:0006508|GO:0008234
Pvu3g0540 576 SUPERFAMILY Cysteine proteinases 302 541 IPR038765 -
Pvu3g0540 576 MobiDBLite consensus disorder prediction 87 118 - -
Pvu3g0540 576 MobiDBLite consensus disorder prediction 178 213 - -
Pvu3g0540 576 Gene3D - 304 540 - -
Pvu3g0540 576 MobiDBLite consensus disorder prediction 550 567 - -
Pvu3g0540 576 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 42 560 - -
Pvu3g0540 576 Gene3D - 351 479 - -
Pvu3g0540 576 MobiDBLite consensus disorder prediction 87 106 - -
Pvu3g0540 576 Pfam Ulp1 protease family, C-terminal catalytic domain 328 527 IPR003653 GO:0006508|GO:0008234
Pvu3g0540 576 MobiDBLite consensus disorder prediction 550 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0540 Pvu-Chr3 6485301 6500275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0540 K16287 - gmx:100790705 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0540 3 6485301 6500275 Pvu3g0540 3 6485301 6500275 ECH