Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0493 ATGAACCACAAGCCGTGGCTTTGGAGGAAAAAATCTATGGAGAAAACAATCTTGGCAGGGGACAAAGTTGTCAGTCCTTCTAGACCCATTGAAGAAGAGGTATACAAACTTCCATTAACTAAAGAATCTGGATCGGAAAGATCATCAAAAAGTCTGAATGAGAAGTTGGCAACAGTCCTTCTTGATTCTCATTCTGGAGATGACCCTTTAGCAAAACATGTCCAAAAGTCTCAACAGGAAATTAAAGGCAAGGACAAGACAAAACAGGAAGTAAAACCTGTTAAAGACTTCAATGAAAAAGCGTCTACTGTGACTGTTTCTCCTGTAGATGCAACATTGAAGGAACATTTGCAGCCACCAAGCTGTGTTCAAGAAGAACAAGAGAAAAAATTGAGTGGCGTCATTCCAAAGATATCAATAGAGGATGAGAAGATTCAGAAAGAATTGGAAGAGAAATTGAGGAAAACAAGTAAAATGATAGATGACCTAACTGCCGAGAATACTCATCTTGCTAATGCCTTGCTAACCAAGGAAAAATCAATTGGGGACCTAGTAAAATGTAAGCAAGAAGCAGATGCTGAGTTTAGTACATTGATGACTAGGTTAGACACCACAGAAAAGGAAAATTCTTTCCTAAGATATGAGTTTCACGTGCTGGAGAAGGAACTTGAGATCCGGAAAGAGGAGACAGACTATAGCCGTCAGTACGCAGATGCCTCTCATAAACAGTACCTTGAGTGCTCTCAGAAAGTGTCATATTTAGAAGCTGAGTCTCAAAAACTCCGTCTTATGCTACAAAAAAGATCACCTGGTTCTGCTGGTGTGGTGAATATGAAGAATGAAGTTGGAATGATGAGAAGAAGAAAGTCAAATTCCAACAGGGAATTGATCTACAAAGACAATGATGCTGATGTATCTGAGAAAAGTTTCTCCTTAATGATGAGACGCTTGCAAGATCTGGATGAGGAGAACAAGGCTCTCAAAAGAATTTTAACCAAGAAAAACTCTGAACTAGAATCTTCAAGACTTATGTATGCTGAAACAGCTTCCAGATTATCACAGGCTGAGATTCTACTTAGAAAGGTTTCTGAAAATCAGAAGTGTGTGGAGCTATCTCGGTGTTATCCCACATCAAATGAACTTCCTTTGATGTCAAACTGTGACATTTATAGTGATGATGAGGCTATCTCTTCTGGATCCTGGGCGAATGCTCTTATTTCAGAACTTGAACATTTAAGAACTTCAGAGGCTAAAGTTCGTAAGAGCAGTAAAGCCACTGAAGTTTCAGACATGAGTTTCATGGATGATTTTGTTGAGATGGAAAAACGAGCTATAGTTTCTATTGATACACCTAAAGGAGGATGCTTCTCTGATATAAGTGGTAGGGAGCTAGTGCCAGTTGAACAAGATCTTCTTGGCTTCAGTGAGAGGAAAAAGGAGATCCAATTCAAACATACAACTGAAAAATCATTTGACTGGCTTCAGATTGTTTTGAATGCAATCTTAGAGGAGAAAATCGTATCAAAACGAGGTCTTCATGAACTGTTTTATGACATAAAAATTGCTTTGGATTGCATGAATCATCCAACTGCTTGCAAACCTGATACAGAAGCAGAAAACAAGCAACGCCTCAATTCTAATTTGAGAAAGTCAATCCACAGGATTATCAACCTCATTGAAGGTATTGCTCCCAAGTCATTTATGTGCAACAATTGTCCAGATTGCTTGGGGGAGAATAAGCATTCAGACATATCCCAGTCACCAACACCCAAAGACTATTTTGTTCATGTTTTCCAATGGAAAGTAACAGACTTAAATCCTCTCCTGCACCAACTTGTTCACACCTGCAAAGATTTGTTGACAGGGAGAGCTGACTTTGAAAATTTTATTGGGGAAGTAGCATTTGCTTTGGACTGGAGCGTTAATAACTGTGCCACCTCCACAAATGCTGCAATTGCGAGGGATAAGATCAAGAAGCATTTTAGCAGTCATTTTTCACAAAATGAAAATAAAATAGATGACGAAGATAAACAGTCTTCTCAATCAGCTTCATATGTATATCTAGAAGATCAGTGTGAGCTCTTGAACACAAAGAATAGTCAGTGTGATCTCCTTGAAGATATTAGAAAGTTAAAAGATGACTTGAGGAATGCAAAAACTGCGAAGAAAGACTTGGAACAAAAGCTGATGTCAGTAACTGATGAGAGTCAGAACTTGACAAAACAATGTCAAGGAGCACAGAATAACATCAGAGGTTTAGAATCAGAAATAGAGACACTGAAAGATCAGATTGAGAAACAAAAGATCGTAAATGAAGATCTTGATACACAGCTTACAATGGCCCAGGCCAAGTTAAATGACATTTTTCAAAAGTTTTCGTCTTTAGAAGTTGAATTAGAGGATAAAAATAACTCCTGTGAGGAATTAGAAGCGACATGTCTAGAACTTCAACTCCAATTGGAGAGCATTGCAAAGAAGGAATCTCCAACATATGGCAGATACGAAGTAGAAAAGATATACCAAACTGGCTGGGAGATCACAACAGCTTCATCAAAGTTGGCAGAGTGTCAAGAAACCATCTTAAACCTCGGGAAACAACTCAAGGCACTTGCTTCATCTAGTGAAGTCTCAATTTTTGACAAGGTTGTCTCCACAGCTAGTACTGTGGCCAATCCAACCCAGAAGAAGAACTTGATCAAACGATCCTCTCTACGCAATCAAATGCAAGCTGAGGATGAAGCTAAAGGAATTATCTATAAGTCTGTCCAAAATGAAGAAAGTAGGAGAGAAGAAGATGTGCAGATGCCACCCCTTGTTCAATCTGAAACCGAAAACTCTTTGCAAAGTCCTAATAACTTGGTTAATTCTCCAGAAACAAGTCTCACTTCAGAAAAAAATGAAAGAAGCAAAGGCACAGGATCAATGGCAATGGTGGCCGGTAAGAAACAAGTAGGCTTTGGTTTTCTGAGAAAACTGCTGTCAAGACAGAAGAAAGGGAGGGCTAAGGGAACCAAGTTATTAGCCAAAGCATGA 3033 0.3894 MNHKPWLWRKKSMEKTILAGDKVVSPSRPIEEEVYKLPLTKESGSERSSKSLNEKLATVLLDSHSGDDPLAKHVQKSQQEIKGKDKTKQEVKPVKDFNEKASTVTVSPVDATLKEHLQPPSCVQEEQEKKLSGVIPKISIEDEKIQKELEEKLRKTSKMIDDLTAENTHLANALLTKEKSIGDLVKCKQEADAEFSTLMTRLDTTEKENSFLRYEFHVLEKELEIRKEETDYSRQYADASHKQYLECSQKVSYLEAESQKLRLMLQKRSPGSAGVVNMKNEVGMMRRRKSNSNRELIYKDNDADVSEKSFSLMMRRLQDLDEENKALKRILTKKNSELESSRLMYAETASRLSQAEILLRKVSENQKCVELSRCYPTSNELPLMSNCDIYSDDEAISSGSWANALISELEHLRTSEAKVRKSSKATEVSDMSFMDDFVEMEKRAIVSIDTPKGGCFSDISGRELVPVEQDLLGFSERKKEIQFKHTTEKSFDWLQIVLNAILEEKIVSKRGLHELFYDIKIALDCMNHPTACKPDTEAENKQRLNSNLRKSIHRIINLIEGIAPKSFMCNNCPDCLGENKHSDISQSPTPKDYFVHVFQWKVTDLNPLLHQLVHTCKDLLTGRADFENFIGEVAFALDWSVNNCATSTNAAIARDKIKKHFSSHFSQNENKIDDEDKQSSQSASYVYLEDQCELLNTKNSQCDLLEDIRKLKDDLRNAKTAKKDLEQKLMSVTDESQNLTKQCQGAQNNIRGLESEIETLKDQIEKQKIVNEDLDTQLTMAQAKLNDIFQKFSSLEVELEDKNNSCEELEATCLELQLQLESIAKKESPTYGRYEVEKIYQTGWEITTASSKLAECQETILNLGKQLKALASSSEVSIFDKVVSTASTVANPTQKKNLIKRSSLRNQMQAEDEAKGIIYKSVQNEESRREEDVQMPPLVQSETENSLQSPNNLVNSPETSLTSEKNERSKGTGSMAMVAGKKQVGFGFLRKLLSRQKKGRAKGTKLLAKA* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0493 1010 Coils Coil 708 777 - -
Pvu3g0493 1010 Coils Coil 146 166 - -
Pvu3g0493 1010 Gene3D - 660 835 - -
Pvu3g0493 1010 MobiDBLite consensus disorder prediction 922 977 - -
Pvu3g0493 1010 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1003 - -
Pvu3g0493 1010 Pfam Filament-like plant protein, long coiled-coil 67 875 IPR008587 -
Pvu3g0493 1010 Coils Coil 188 208 - -
Pvu3g0493 1010 SUPERFAMILY Tropomyosin 655 824 - -
Pvu3g0493 1010 Coils Coil 317 337 - -
Pvu3g0493 1010 MobiDBLite consensus disorder prediction 66 90 - -
Pvu3g0493 1010 PANTHER FILAMENT-LIKE PROTEIN (DUF869) 1 1003 - -
Pvu3g0493 1010 MobiDBLite consensus disorder prediction 938 970 - -
Pvu3g0493 1010 Coils Coil 792 826 - -
Pvu3g0493 1010 MobiDBLite consensus disorder prediction 63 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0493 Pvu-Chr3 5690505 5695482 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0493 - - gmx:100810631 1628.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0493 3 5690505 5695482 Pvu3g0493 3 5690505 5695482 ECH