Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0489 ATGAATTCGATTCATCTCATAAACACTCTTGCTGCTCCGTTTCGGTCTTGTTCTCCTCCGTCCCTTTTTCCGCAATGCCATTATCCTCTCCGTTCCTCCGCTGTACCCAAACGGCGTCGTTTCTCTCACTCCTCCGGGTTCCGCCTCGCCTCAACTCCAACCGTGAATTCGGTTCCCCGTGGGAATGGAACCTATACCGTTGCTGATTTCATGACAAAGAAGCAAGATTTGTATGTTGTGAAAACCACCACCACCGTTGATGAAGCTCTGGAGGCTCTGGTAAACAACAGAATCAGTGGTCTTCCGGTAATTGATGATAACTGGAATTTGGTTGGAGTTGTTTCAGATTACGATTTATTAGCTATTGATTCGATATCAGGAGGTTCTCAGACTGATGCAAACCTGTTCCCCAACGTTGATAGTACTTGGAAAACATTCAATGAGATACAAAAGCTGCTTAGTAAGACTAATGGCCAAGTTGTTGGTGACTTGATGACTCCAACTCCACTCGTTGTCCATGAATCGACAAGTCTAGAGGAAGCTGCTAGGCTGTTGCTTGAAACAAAATATCGTAGACTACCTGTGGTCGATGATGATGGAAAGCTGGCTGGACTTATTACAAGGGGAAATATAGTTAAGGCAGCTCTGCTATCAAAACGCGCGGAGAGTGGTGATAGTGTTTGA 684 0.4532 MNSIHLINTLAAPFRSCSPPSLFPQCHYPLRSSAVPKRRRFSHSSGFRLASTPTVNSVPRGNGTYTVADFMTKKQDLYVVKTTTTVDEALEALVNNRISGLPVIDDNWNLVGVVSDYDLLAIDSISGGSQTDANLFPNVDSTWKTFNEIQKLLSKTNGQVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLAGLITRGNIVKAALLSKRAESGDSV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0489 227 Gene3D - 62 221 IPR046342 -
Pvu3g0489 227 ProSiteProfiles CBS domain profile. 165 222 IPR000644 -
Pvu3g0489 227 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 46 221 - -
Pvu3g0489 227 SUPERFAMILY CBS-domain pair 64 216 IPR046342 -
Pvu3g0489 227 ProSiteProfiles CBS domain profile. 71 131 IPR000644 -
Pvu3g0489 227 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 46 221 - -
Pvu3g0489 227 SMART cbs_1 168 216 IPR000644 -
Pvu3g0489 227 SMART cbs_1 76 124 IPR000644 -
Pvu3g0489 227 Pfam CBS domain 161 214 IPR000644 -
Pvu3g0489 227 Pfam CBS domain 67 121 IPR000644 -
Pvu3g0489 227 CDD CBS_pair_plant_CBSX 73 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0489 Pvu-Chr3 5632901 5637646 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0489 - - gmx:100781400 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0489 3 5632901 5637646 Pvu3g0489 3 5632901 5637646 ECH