Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0446 ATGAGAAGCTCGTGGTTCAATAAGTTATCCATCATCATTGGCCATAAATCCCCTGTGAACTGGTTATTCTTGTGCCTGATCAGCTTGCTTCTGCTGATTTTTGTTCTAGGTTCGTCTTCTTCTAATATTGTTGATCTGGCACCTCATGTTCCGGTGTCTCTCATATACACAAACTATAGGAGGGTTAAGGAACAAGCGGCGGTTGATTATTTAGAGCTAAGGTCTGTGGCAAGGGGTATCTCTAGACAAAGAGAATTTGACCTCTGTGGCAAGGAAAGAGAGAATTTTGTGCCTTGTTACAATGTTTCAGCCAATTTGTTATCTGGGTTTAAAGAAGGAGAAGAGTTTGATAGGCACTGTGAACTGTTAGTTGAAGCAGAAAGGTGTTTGGTTCGTCCTCCTAAGGAATATAAAATTCCCTTCCAATGGCCAACTGGCAGGGATGTTATATGGAGTGGAAATGTAAAGATAACCAAAAACCAATTTCTTTCATCTGGAAGTATGACCAAAAGGTTAATGCTTCTAGAAGAGAACCAAATTGCTTTCCACCCGGAGGATGACCGTGTGAAAGATTACTCTCGTCAACTTGCACAGATGATTGGCTTGGGAAGTGACAAAGAGTTTCCTCAAGCTGGTGTTCGCACTATACTAGACATTACTTGTGGATTTGGTAGCTTTGCAGCTCATTTGGCATCACTGAATATAAGGACAGTTTGCGTTGCTGCATATGAGGCAACAGGTAGCCAGGTTCAGTTGGCCCTTGAGAGGGGCCTTCCTGCTGTGATTGGCAACTTTGTTGCAAGACAACTTCCATTTACTTCATTATCATATGACATAGTTCACTGTGCTCAATGTGGCATCTTTTGGGATGAAAAAGATGGAATTTTCCTCATAGAAATTGACCGTGTTCTTAAACCTGGAGGATACTTTGTGTTAACCTCGACCCCAAGCAAGACACAGGAAAGTTCATCAAAAATGAAAAGGAGGAATATGTTGAAGCCAATGGAAGAACTGACCCAGCAACTCTGTTGGACTCTTCTAGCTCAGCAAGATGAGACATTCATCTGGAAGAAAACTGCTGACATCAATTGCTATGCATCTCGAAAGAAGCATGCTATACCATTATGCAAAGAATATGATGATGTTCAATCATATTATCGGCCTCTTCAACCATGTATAAGTGGGACCTCTAGCAAGCGCTGGATTCCAATACAGAATAGATCCTCTGGATCGGATTTAAGAGTTCAGTCTGAAGATTATTTTGAAGACTTAAAATTCTGGAGATCAACTCTCAAGAACTATTGGTCTTTGCTTACACCTCTAATTTTCTCCGATCATCCAAAGAGACCGGGAGATGAAGATCCATTACCTCCATTTAACATGATTCGTAATGTAATGGACATGAGTACTCAATATGGGGGGTTGAACACTGCCCTTCTGGAAGAGAAAAAATCAGTTTGGGTCATGAATGTTGTTCCTGCTACAGTGTCTAATTCACTTCCTCTTATACTAGATAAAGGTTTTGTTGGTGTTATGCATGACTGGTGTGAACCTTTCCCTACGTACCCCCGGACGTATGATATGCTTCACGGGAGTGGACTTCTTTCTCATATCACTTCAGAGAGATGCAGCATGATGAACCTATTCTTAGAGATGGACAGAATACTGCGTCCAGAGGGATGGGTCATTCTTTCTGATGACAAGCGAACTATAGAGATGGCACGCGCACTCACTGCACAAGTACGTTGGGAAGCAAGGGTAATTGATCTTCAGAATGGAAGTGACCAGCGACTTCTTGTTTGCCAGAAACCATTTCTGAAAAAATGA 1827 0.4176 MRSSWFNKLSIIIGHKSPVNWLFLCLISLLLLIFVLGSSSSNIVDLAPHVPVSLIYTNYRRVKEQAAVDYLELRSVARGISRQREFDLCGKERENFVPCYNVSANLLSGFKEGEEFDRHCELLVEAERCLVRPPKEYKIPFQWPTGRDVIWSGNVKITKNQFLSSGSMTKRLMLLEENQIAFHPEDDRVKDYSRQLAQMIGLGSDKEFPQAGVRTILDITCGFGSFAAHLASLNIRTVCVAAYEATGSQVQLALERGLPAVIGNFVARQLPFTSLSYDIVHCAQCGIFWDEKDGIFLIEIDRVLKPGGYFVLTSTPSKTQESSSKMKRRNMLKPMEELTQQLCWTLLAQQDETFIWKKTADINCYASRKKHAIPLCKEYDDVQSYYRPLQPCISGTSSKRWIPIQNRSSGSDLRVQSEDYFEDLKFWRSTLKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMSTQYGGLNTALLEEKKSVWVMNVVPATVSNSLPLILDKGFVGVMHDWCEPFPTYPRTYDMLHGSGLLSHITSERCSMMNLFLEMDRILRPEGWVILSDDKRTIEMARALTAQVRWEARVIDLQNGSDQRLLVCQKPFLKK* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0446 608 CDD AdoMet_MTases 215 313 - -
Pvu3g0446 608 PANTHER METHYLTRANSFERASE PMT4-RELATED 1 607 - -
Pvu3g0446 608 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 603 IPR004159 GO:0008168
Pvu3g0446 608 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 607 IPR004159 GO:0008168
Pvu3g0446 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 459 570 IPR029063 -
Pvu3g0446 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 320 IPR029063 -
Pvu3g0446 608 Gene3D Vaccinia Virus protein VP39 183 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0446 Pvu-Chr3 4837038 4840992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0446 K23870 - gmx:100781425 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0446 3 4837038 4840992 Pvu3g0446 3 4837038 4840992 ECH
Pvu2g1058 2 20481510 20486990 Pvu3g0446 3 4837038 4840992 PCT