Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0432 ATGATGGAGGACTATAAAAACCGTCACCTCCAGCAGCAGTATCAACAAAACCATCTTCAGCAACACCAACAGCTGAATCAGAACCACAACTCTGAGAGGATGGATAGGTACCCGAGGGATTTGCTTCAGGGATTTGTCATGAGAGGTGTTACCGTTAGGGATGATAACATGAATAACGTTATCACATCCCAGCATAATCATCACCATCAGCATGAGCAACAACCACCCCAACACCAGGAAGAGGATGAAGAACTTGAGTTGAACCTTGGTCTATCTCTCGGAGGAAGATTCGGAGTGGACAAGAACGCAAAAAAGAAGAAACTTATGCGTTCTTCTTCTGTGGTGGGGACAATGCCTCTGTTCAGGGAGGACGATGCGGTGGCTCCGCCGCTCGCAGCGTTCCCTTCCCTGATGAGGACGTCCTCACTGCCCACCGAGACGGAGGAGGAGTGGCGGAGGAGGAAGGAGATGCAGACTCTGCGCCGGATGGAGGCCAAGAGACGCCGGTCTGAGAAGCAGAAGGGCTCCCGGGAAGGCGTAGTCGGTGGCGGCAGCGCCGCCCCCGAAGAGACTGAGGGTGGCAGTATGGCGACAATGGGGTTGACCAGATTTGGTTCTGCCACGTTGGCTCCACCCCCACTGGGGTGGGGTGTGGCGGCGCCGAAGCAGGTTGTTCTTGGTGATGTGTTGGGGAAGGGAAAAGGTTTTCAAGGTCTGTTTGGGCAACCATCTTCTCAGGGATCGGCCGATTCACAAGGTGGAAGCTCTTCATCGTTGTCCGAAATGGATAGCAAGGCTTTTTTAGGATCGAGTAGTTGTGGTGAAGCAAGCCCTGGCAGTAATCATTCAGCACAAGAACGAATCAGCCAGGAAGCTGTGGGATTAGGGGCTAAGACAATTGAGAATGTGGCTAGAACTTCCAAAGCTGAGGTGGAGAATCCATCTAAGAAATTCCATCCTTCCCAAAACATAATGGGAAAGCAAATTGGGACAAACTCAATTGAAGACATGCCTTGTGTGTTTACAAAAGGGGATGGTCCTAATGGAAGAAGGATTGAGGGAATCTTGTACAAATATGGTAAAGGAGAGGAAGTGAGAATCATGTGTGTGTGCCATGGAAACTTCCTCTCTCCAGCTGAGTTTGTTAAGCATGCTGGTGGTGGGGATGTTGCTCACCCCCTTAGGCACATTGTTGTCAACCCTTCTGCTGCACCCTTTTAG 1221 0.5094 MMEDYKNRHLQQQYQQNHLQQHQQLNQNHNSERMDRYPRDLLQGFVMRGVTVRDDNMNNVITSQHNHHHQHEQQPPQHQEEDEELELNLGLSLGGRFGVDKNAKKKKLMRSSSVVGTMPLFREDDAVAPPLAAFPSLMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQKGSREGVVGGGSAAPEETEGGSMATMGLTRFGSATLAPPPLGWGVAAPKQVVLGDVLGKGKGFQGLFGQPSSQGSADSQGGSSSSLSEMDSKAFLGSSSCGEASPGSNHSAQERISQEAVGLGAKTIENVARTSKAEVENPSKKFHPSQNIMGKQIGTNSIEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAAPF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0432 406 MobiDBLite consensus disorder prediction 160 176 - -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 65 84 - -
Pvu3g0432 406 PANTHER AFP HOMOLOG 2 34 404 IPR031307 GO:0007165
Pvu3g0432 406 PANTHER NINJA-FAMILY PROTEIN AFP1 34 404 - -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 237 287 - -
Pvu3g0432 406 Pfam Tify domain binding domain 365 399 IPR032308 -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 239 287 - -
Pvu3g0432 406 Pfam Ethylene-responsive binding factor-associated repression 80 116 IPR012463 -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 160 197 - -
Pvu3g0432 406 Pfam Putative nuclear localisation signal 137 264 IPR032310 -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 8 31 - -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 305 324 - -
Pvu3g0432 406 Coils Coil 153 173 - -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 64 84 - -
Pvu3g0432 406 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0432 Pvu-Chr3 4685430 4689844 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0432 - - vun:114173799 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0432 3 4685430 4689844 Pvu3g0432 3 4685430 4689844 ECH