Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0130 ATGGTTTTCCCCAAAACTCAATATCAGCGTCGTTGCTTTTCGTCAAACACAAGGAGTGCGTGTTCATCTTCTTCCAATGACGCTATCGTTGGGGAGAGAGCAATAGCGTACCTTAAGCGCCACCCTCAAATGCTCTCATCGCTTTCTCCTCACTTCACACCCAATGCAGCTTCCTACGTTTTACTGCAATCCCAATCCAACCAACGCATTCTCCTCAAATTCCTCTCATGGGCCCAAGCCCAGGCCCAGGCCCACACTTTCCTCACCCCGCACTGCAAGTGCCTCGCCATCCACATCCTCACCCGCTTCAAGCTCTACAACACTGCCCACTCCCTCGCCGCCACCCTCCTCCACCACCCCGCTGCCGACCTCTTCCGCCACCTTCATGACACTCACAGCCTCTGCAACTCCTCCACCGCCGCCGCGGCCGGTGGGTTCGACCTCGTCGTCAAATCCCTCTCCCGCCTCGACTTCCCCGACAAAGCCCTCGCTGTCCTCCACCTCGCCACCCGCCACGGCTTCGCGCTCGCCCTCCTCTCCCACAACGCCATCCTCCACGCGCTGCTCCGCCGCGTGCACCACAAAAGCTCCCTCCGCCAAGCCGAGCAAATGTTCCGCGAGATGATCCGCAGCGGCGTGTCGCCGAACGTGTACACTTACAACATCATGATTCGCGGCGTGGCTGACCGGGGAGACCTGGAGAAGGGGTTTGGGTTCGTGCGCGAGATGGAGAGGGAAGGGGTTTCGCCGACTGTGGTTACTTACAACACGCTGATCGACGCGTGCTGCAAGAGGAGGAAGGTGAAGGAGGCGATGCGGCTGCTGAGAATGATGGCGGCGAGGGGCGTGGTTGCGAATTTGATTTCGTACAATTCGGTGATCAATGGATTGTTGGGTGAAGGGAGGATGAGTGAGGTTGGGGAGTTGGTTGAGGAGATGAGTGAGAGAGGGTTTGTTCCTGATGAGGTCACTTATAACACTCTTGTTAATGGGTTTTGCAAGGAGGGGAATTTCCACCAGGGCTTTGTGCTGCTTGCTGAGATGGTTGGGAAGGGGTTGTCACCAAATGTTGTTACTTACACTACTTTGATCAACTGTATGTGCAAGGCTGGGAATTTGAGTCGAGCTATGGAGATTTTCGATCAGATGCGTGTTAGGGGGCTGAGGCCAAATGAGAGGACTTACACCACCATGGTTGATGGGTTCTGCCGGAAAGGGTTGCTGAATGATGCTTATAGGGTCTTGAGTGAGATGATTGTTAGTGGATTTTCGCCGTCGGTTGTGACTTACAACGCCCTTGTCCATGGATATTGCTTTCTGGGGAGGGTGGAGGAGGCCGTGGGGATTTTGAGGGGGATGGTTGAGAGAGGGTTGTTTCCTGATGTTGTGAGTTACAGCACTGTTATAGCTGGGTTTTGCCGAGAGCGAGAGCTGGGGAAAGCGTTTCGAATGAAGGAGGAGATGGTCGAGAAGGGTGTTTTGCCTGATGGGATTACATATTCATCGCTCATACAGGGTCTTTGTCTGCAGCAGAAACTGGTGGAAGCTTTTGATTTGTTCAGAGAGATGCTGCAAATGGGTCTCCTCCCTGATGAGGTCACGTATACTAGTTTGATTAATGCTCATTGCGCTCAGGGTGAGTTGAGCAAGGCTCTTCGTCTGCACGATGAAATGATGCAGAGGGGCTTTTTGCCTGATGATGTTACCTACAGTGTACTTATCAATGGACTTAATAAGAAGGCTAGGACGAAGGAAGCAAAGAGGCTTCTTCTGAAGTTGTTTTACGAGGAGCGTGTACCAAATCATGTAACATACAATACACTGATCGAAAACTGCAGTAATAATGAGTTTAAGAGTGTGGTAGGTCTTGTGAAAGGATTCTGCATGAAGGGTTTGATGAATGAAGCGGATCAAGTTTTTGAGACAATGCTTCGGAGGAATCATAAGCCTAATGCAACAATTCATAGTCTAATAATACACGGACATTGTAGAAGTGGAAATGTTCACAAGGCGTATAAGATGTACACGGAGTTGGAACATTGTGGTTTTGTTTCTCATACGGTGGCTGTAATTGCTCTTGTTAAGGCACTATCTAGGGAAGGGATGAATGATGAGCTTAGTCAAGTATTGCAAAATGTGTTGAGGAGTTGCAAGCTCAATGATGCTGAGGTAGCTAAAGTACTTGTTGAGGTTAACTTCAAAGAAGGTAACATGGACGCTGTTTTGAATGTGCTAACTGAAATGGCCAAGGATGGCCTGCTACCTGATGGAGGGATGCATTCACTTGCTCTGGGAAGTACCTAA 2304 0.5052 MVFPKTQYQRRCFSSNTRSACSSSSNDAIVGERAIAYLKRHPQMLSSLSPHFTPNAASYVLLQSQSNQRILLKFLSWAQAQAQAHTFLTPHCKCLAIHILTRFKLYNTAHSLAATLLHHPAADLFRHLHDTHSLCNSSTAAAAGGFDLVVKSLSRLDFPDKALAVLHLATRHGFALALLSHNAILHALLRRVHHKSSLRQAEQMFREMIRSGVSPNVYTYNIMIRGVADRGDLEKGFGFVREMEREGVSPTVVTYNTLIDACCKRRKVKEAMRLLRMMAARGVVANLISYNSVINGLLGEGRMSEVGELVEEMSERGFVPDEVTYNTLVNGFCKEGNFHQGFVLLAEMVGKGLSPNVVTYTTLINCMCKAGNLSRAMEIFDQMRVRGLRPNERTYTTMVDGFCRKGLLNDAYRVLSEMIVSGFSPSVVTYNALVHGYCFLGRVEEAVGILRGMVERGLFPDVVSYSTVIAGFCRERELGKAFRMKEEMVEKGVLPDGITYSSLIQGLCLQQKLVEAFDLFREMLQMGLLPDEVTYTSLINAHCAQGELSKALRLHDEMMQRGFLPDDVTYSVLINGLNKKARTKEAKRLLLKLFYEERVPNHVTYNTLIENCSNNEFKSVVGLVKGFCMKGLMNEADQVFETMLRRNHKPNATIHSLIIHGHCRSGNVHKAYKMYTELEHCGFVSHTVAVIALVKALSREGMNDELSQVLQNVLRSCKLNDAEVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGMHSLALGST* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0130 767 Pfam PPR repeat family 460 508 IPR002885 -
Pvu3g0130 767 Pfam PPR repeat family 286 334 IPR002885 -
Pvu3g0130 767 Pfam PPR repeat family 355 404 IPR002885 -
Pvu3g0130 767 Pfam PPR repeat family 530 578 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 566 600 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 288 322 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 253 286 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 498 532 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 218 252 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 623 652 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 323 357 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 428 462 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 394 427 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 463 496 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 655 684 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 358 392 IPR002885 -
Pvu3g0130 767 TIGRFAM PPR: pentatricopeptide repeat domain 533 566 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 391 425 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 251 285 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
Pvu3g0130 767 Gene3D Tetratricopeptide repeat domain 145 315 IPR011990 GO:0005515
Pvu3g0130 767 Pfam Pentatricopeptide repeat domain 204 265 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 286 320 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 426 460 IPR002885 -
Pvu3g0130 767 Gene3D Tetratricopeptide repeat domain 617 761 IPR011990 GO:0005515
Pvu3g0130 767 Pfam PPR repeat 422 454 IPR002885 -
Pvu3g0130 767 Pfam PPR repeat 647 677 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 321 355 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 530 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
Pvu3g0130 767 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 94 475 - -
Pvu3g0130 767 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 390 614 - -
Pvu3g0130 767 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 441 756 - -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 616 650 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Pvu3g0130 767 Gene3D Tetratricopeptide repeat domain 316 384 IPR011990 GO:0005515
Pvu3g0130 767 Gene3D Tetratricopeptide repeat domain 385 453 IPR011990 GO:0005515
Pvu3g0130 767 Gene3D Tetratricopeptide repeat domain 454 525 IPR011990 GO:0005515
Pvu3g0130 767 Gene3D Tetratricopeptide repeat domain 526 595 IPR011990 GO:0005515
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 651 685 IPR002885 -
Pvu3g0130 767 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 216 250 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0130 297 760 Glycosyltransferase AT1G05670 28.326 6.46e-58 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0130 - - gmx:100808787 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0130 3 1176914 1179539 Pvu3g0130 3 1176914 1179539 ECH