Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0123 ATGAGCGCAGTCTCTTCCAGTTCCCTATGTCTTCACACTGCCCATTTTTGGAACAAACCCAAGGAGTTTGGAAGGGGGAGAAAGCAGCAAGATAAGAAGGGAATTGTGAAGTGTTCCATCAAGAGTGGGAACCCATCTTCACAAAATGCGGTTCGTGTTGGTGTTCTTGGAGCTAGTGGCTACACTGGTTCTGAGGTTTTGCGACTCTTGGCAAATCATCCACAATTTGGGATTGCACTGATGACTGCCGATAGGAAAGCTGGGCAGCCAATCTCTTCTGCATTCCCACATTTGAGCACTCGGGACTTGCCAGATTTGATTGCAATAAAGGATGCAAACTTTTCTGATGTGGATGCTGTATTCTGTTGTTTGCCTCATGGGACTACTCAGGAAATAATTAAAGGCCTACCAAATCACTTGAAGATTGTTGATCTTTCAGCAGATTTTCGTCTAAAAGATCTTTCTGAGTATGAAGAGTGGTATGGTCAGCCACATAGAGCACCAGATTTACAGAAAGAAGCTGTATATGGATTGACAGAGGTTTCAAGGGAGGAAATAAAGAATGCACGTCTTGTTGCTAATCCTGGTTGTTATCCAACTTCTGTTCAACTACCCCTTGTCCCACTGATAAAGGCTAGTCTAGTTGAGATTAAAAATATTATCATTGATGCTAAATCTGGTGTCAGTGGAGCAGGGCGTAGTCCGAAAGAAAATTTGTTGTTCACTGAAGTAACTGAAGGTCTCAATTCTTATGGTGTTACCCGTCATCGCCATGTTCCTGAAATAGAACAGGGACTCGCTGATGCAGCAGGTTCAAAAGTAACCGTTAGTTTTACACCACACCTAATTCCAATGAGTCGTGGTATGCAGTCAACTATTTATGTGGAAATGGCTCCAGGAGTGAGAACTGAGGACCTGTACCAACAACTGAAGCTCTCATATGAGGATGAAGAATTTGTTGTGGTGTTGGAAAATGGAGCCATTCCTCGAACTCACAGTGTGAAAGGGTCTAATTACTGTTTAATCAATGTTTTTCCGGATCGAATTCCTGGAAGAGCAATAATTATATCTGTTATTGACAATTTAGTGAAGGGAGCTTCAGGTCAAGCTTTGCAAAATCTTAACTTGATAATGGGATTTCCAGAAAATTTGGGACTTCAATACCTGCCTCTGTTTCCTTAG 1182 0.4213 MSAVSSSSLCLHTAHFWNKPKEFGRGRKQQDKKGIVKCSIKSGNPSSQNAVRVGVLGASGYTGSEVLRLLANHPQFGIALMTADRKAGQPISSAFPHLSTRDLPDLIAIKDANFSDVDAVFCCLPHGTTQEIIKGLPNHLKIVDLSADFRLKDLSEYEEWYGQPHRAPDLQKEAVYGLTEVSREEIKNARLVANPGCYPTSVQLPLVPLIKASLVEIKNIIIDAKSGVSGAGRSPKENLLFTEVTEGLNSYGVTRHRHVPEIEQGLADAAGSKVTVSFTPHLIPMSRGMQSTIYVEMAPGVRTEDLYQQLKLSYEDEEFVVVLENGAIPRTHSVKGSNYCLINVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLIMGFPENLGLQYLPLFP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0123 393 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 51 387 IPR000706 GO:0003942|GO:0006526
Pvu3g0123 393 Pfam Semialdehyde dehydrogenase, dimerisation domain 206 364 IPR012280 GO:0008652|GO:0016620|GO:0046983
Pvu3g0123 393 Gene3D - 52 379 - -
Pvu3g0123 393 TIGRFAM argC: N-acetyl-gamma-glutamyl-phosphate reductase 51 393 IPR000706 GO:0003942|GO:0006526
Pvu3g0123 393 SMART Semialdhyde_dh_3 52 189 IPR000534 GO:0016620|GO:0051287
Pvu3g0123 393 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 29 393 - -
Pvu3g0123 393 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 197 361 - -
Pvu3g0123 393 Gene3D Dihydrodipicolinate Reductase; domain 2 195 361 - -
Pvu3g0123 393 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 192 208 IPR023013 GO:0003942
Pvu3g0123 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 222 IPR036291 -
Pvu3g0123 393 Pfam Semialdehyde dehydrogenase, NAD binding domain 52 189 IPR000534 GO:0016620|GO:0051287
Pvu3g0123 393 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED 29 393 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0123 K00145 - gmx:100801527 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0123 3 1121249 1127162 Pvu3g0123 3 1121249 1127162 ECH