Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0122 ATGGGAGAGATAGATCCAGCTTTCATTCAAACACCAGAGAACAGGCCAAAGCTTTGTATCATTGAAGAAGAGGGAATCCCTGTGATAGACCTCTCCCCTTTATTCTGCAGCTCTTCTTCCATCACAGACCCTTCCTTTGAAGATCTTGTGAGGAAAATAGGCAGTGCATGCAGAGAGTGGGGGTTCTTCCAAGTGATCAACCATGGAGCCCCAGTTGAGAGGAGGAAGAAGATGGAAGCAGAAGCAAGGAAGTTCTTTCACCAGAGGAAGGAGCAGAAGAATGAGGTGAGAAGGGATGATGTGCATGTTATAGGGTACTTTGACTCTGAGCTTACCAGGAATGTTAGGGATTGGAAGGAGGTGTTTGATTACACTGTAGAGGAACCTACCTTGGTGCCAGCTTCACCTGATCCTCATGATCACCAAATCACTCATTGGTATAACAAGTGGCCCCAATACCCACCACACTTAAGAGAGACATTGAAAGAGTATAGTGAGAAGATGGAGGAGCTAGCACTGAAGTTAATGGAACTTATTGCTTTGAGCTTAGGTTTGGCACCAAAACGTTTTCATGGTTTCTTCAAAGATCAAACCAGTTGGATGAAGCTCAATTTTTATCCACCTTGCCCTTCACCTCACCTTGCTTTGGGATGTGGTCCTCACAAGGATAGTGGTGCTTTAACTGTCCTTGCTCAAGATGATGTTAGTGGCTTAGAGGTAAAGAGAAAATCTGATGGCCAATGGGTTAGGGTTAAACCACGTCCTAATGCTTATATTATCAATGTTGGAGCTGTAATCCAGGTTTGGAGCAATGAAACTTATGAGAGTGTTGAGCACAGAGTTATGTTGAACACTGAGAAGGAAAGGATCTCATATCCGTTCTTTCTCACGCCTGCACATTACACAATGGTGGAGCCTTTGGAAGAGTTGGTAAATGACCAAAACCCTGCCAAATATAAATCCTACAATTGGGGCAAGTTCTTTGTTACAAGGAAGCGTAGTAATTTCGTCAATCTTAATGTACACAACATTCAAGTATATGATTTCAAGATTAATTAG 1059 0.4287 MGEIDPAFIQTPENRPKLCIIEEEGIPVIDLSPLFCSSSSITDPSFEDLVRKIGSACREWGFFQVINHGAPVERRKKMEAEARKFFHQRKEQKNEVRRDDVHVIGYFDSELTRNVRDWKEVFDYTVEEPTLVPASPDPHDHQITHWYNKWPQYPPHLRETLKEYSEKMEELALKLMELIALSLGLAPKRFHGFFKDQTSWMKLNFYPPCPSPHLALGCGPHKDSGALTVLAQDDVSGLEVKRKSDGQWVRVKPRPNAYIINVGAVIQVWSNETYESVEHRVMLNTEKERISYPFFLTPAHYTMVEPLEELVNDQNPAKYKSYNWGKFFVTRKRSNFVNLNVHNIQVYDFKIN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0122 352 Coils Coil 75 95 - -
Pvu3g0122 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 152 IPR026992 -
Pvu3g0122 352 PRINTS Isopenicillin N synthase signature 53 70 - -
Pvu3g0122 352 PRINTS Isopenicillin N synthase signature 221 242 - -
Pvu3g0122 352 PRINTS Isopenicillin N synthase signature 286 304 - -
Pvu3g0122 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 298 IPR005123 -
Pvu3g0122 352 SUPERFAMILY Clavaminate synthase-like 3 334 - -
Pvu3g0122 352 Pfam 2OG-Fe(II) oxygenase superfamily 201 298 IPR044861 -
Pvu3g0122 352 Gene3D - 1 336 IPR027443 -
Pvu3g0122 352 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 341 - -
Pvu3g0122 352 Coils Coil 161 181 - -
Pvu3g0122 352 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0122 Pvu-Chr3 1113109 1116918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0122 26 320 Glycosyltransferase AT5G59530 33.115 2.39e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0122 - - qsu:112029575 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0122 3 1113109 1116918 Pvu3g0122 3 1113109 1116918 ECH