Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0117 ATGGGTCCTCTAACGCCCACACCCACCATGGACATCATCTATGATCTCATTGAAGAGGCCAAGCTCCGTCTTCTCTGGTGGGCTCTTTGTATATTCGCCATTTCCTATTTCTTCACTCATACAAGTAAATCTATGTGGATGAATCTTCCCATGTCCATTCTGTTTGTTGCTTCTCTGCGCATTCTTTTGAACAAGGTGGAACTCCGTTGGAAGGTTCAGCCACCAAGATTACAGCCTTATCTATCTCACTTGGAGAAAAATCAACTGCCTCTGAATGATGAACAACTCTCTTCTTCTCCTCACCCTCCCAAATGGAAGAAGATCGATTCTCCTGTTGTGGAGGCTGCCTTGAATGATTTCATTGATCTGATATTGAAGGATTTCGTGATAAATATGTGGTATTCTGACATTACTCCAGATATGGAGTTTCCTGAGATGATACGAGACTTAATCATGGACGCTATTGCTGAAGTGTCAGTGAGGGTTAAAGAGATAAACCTTGTTGACTTACTCACGAGGGACATAGTTGATTTAATAGGGGATCATATAGACCTTTTCAGAAGAAATCAAGATGCTATAGGTGTTGATGTCATGTTAACCTTATCCTCTGAGGAGAGGGATGAAAGATTGAAGTTTCATCTGTTGAATTCTAAGGAGCTTCATCCGGCACTAATATCTCCAGAGAGTGAGTACAAGGTTCTCCAGAGGCTAACGAGTGGATTATTAACTACAGTACTGAGAAAACGAGAAGCTCAATGTCCTGTAATTCGATGTATAGCTCGGGAACTTTTAACTTGTTTGATATTGCAACCTGTCATGAATTTGGCAAGCCCAGGGTACATCAATGAGCTAATTGAATCCCTTCTACTGCTCCTTAATGAGGATGGTATAAGTTGGTTGGGGGTATGTGAACATTCAACCAATACAACTCATAATCATGGCCATTCTGGTGCTGGGGGTGGACATGATAACCATACAGGCTCTGCTGATTGGGCACAAATGCTAGAGGCTGCAACCCAGAGAAGAACTGAAGTTCTTACACCTGAGAATCTGGAGAACATGTGGGCAAGAGGAAGGAATTATAGACGGAAACAACATAAAAGTACCAAATCCGGGTCTCAGGACCCTTCTATGAAATGTCCTGCTACTGATGCAACTCCAGAAGGAACGTGTTCTCTGCATTATGTGGGTTCAGATCCCCTCCTCAATGTTGTAGGCTCAAATAGGTCGGAGTCTGCACCAGATGCTGACAAGGAACTCTGTTCTGAAGTAGACCATCATGTTGATGAAGTTAAGGATACCAAGGACTTCACTTCTGAAAAATATAAAGATCTAAAGAGATCCAACAGTGCTTCTCTCCTGGGAAACCAACATCCTCTTAAGGTGTCCTCCCCGAGGTCAGAGTTCCACAACCCTGAATCTGAGAAACATGGTGAGGGATTTCGCGGAAAGATTGGTTCTGACATGGTTGTTAAAAGAGAGGGACATCTTGTTCCAAAGCTTCGGTGTCGGGTGATGGGAGCATATTTTGAGAAACTAGGATCCACTTCTTTTGCTGTATATTCAATTGCAGTGACTGACGGTCTAGAGAAAACTTGGTTTGTTAGAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTAAAAGATATTCCCAATTACTTGCTACATTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAGGATGCCTTTGTCTATCAGAGATGCATTCAGTTTGATAAATATCTCCAGGATCTCCTATCAATAGCTAATATTGCTGAACAACATGAAGTGTGGGACTTTTTAAGTGTTTCCTCAAAGAACTACTCTTTTGGGAAATCTTCTTCAATGATGAGAACCCTGGCAGTCAATGTAGATGATGCCGTGGATGATATTGTACGACAATTTAAAGGTGTTTCAGATGGTTTCATTCGAAAAGTTGTTGGTTCATCATCCCCTACTACGTCAACCAATCATAACATGTCCTGGAACATGGATGAGGTGGATAAAAGTGTTCCAAGGCAAACTAATGCAGAGAGTGCGCTAAGCTCTGATAATGAGGAAGGTGAAAAGGAAGCTAATTTTGGTCATGAGAATATTGATAAAGAAGCACAAGAGAATGAGTGGAATTCTGAAAATGAATTGAGCTCAAAGGAAGATTCACAACTGCTAATAAACCATGATAATGAATCTGCTAACTTGGATCTAGATAGAAAACATGATGTACCAATGGAAGCTAAGGTTGGAAAGGATGTTCCAGCTACAAATTTCAATCCAGTTCCCGACAATATGGAGGATCCAGTTGGAGTTCCACCTGAGTGGACCCCACCTAACGTGACTGTCCCTATTTTGAATTTGGTTGACAATGTATTTCAGCTTAAGAAAAGAGGTTGGCTAAGAAGACAGGTCTTTTGGATTTCAAAACAGATATTACAGGTGGTGATGGAAGATGCTATTGATGATTGGATCCTAAGGGAGATTCATTGGCTTCGCAGAGAGGATACCATTGCCCAGGGGATTCGGTGGCTCCAAGATATTCTCTGGCCTGGTGGTACATTTTTTTTAAGAGTACAGACCCCTCAGCTGTTCATTGGTGGCAGTGCATATTATCAAAAGCCTTTACCAAGCATAAGTGAATCTGGCGGAAGCAGGATGTCCAAATCACAGTCAGGATCTTTCGAGCTTCAGCTTGAGGCTATTCGTAGAGCAAATGATTTGAAGAAATTTCTCTTTGATGGAGCTCCAACAGCTTTAGTTGGCTTAATTGGTCAGAAGCAGTACAAACGTTGTGCCAGTGATATATATTACTTTACTCAGTCTTCCATATGTGTGAAGCAACTTGCTTATGCAATACTTGAACTTCTACTCATATCCATCTTTCCTGAGTTGAGGAATGTTGTCATTAGTGTTCATGAGAATATGCATGTTCACCAACCTGTATAG 2949 0.4157 MGPLTPTPTMDIIYDLIEEAKLRLLWWALCIFAISYFFTHTSKSMWMNLPMSILFVASLRILLNKVELRWKVQPPRLQPYLSHLEKNQLPLNDEQLSSSPHPPKWKKIDSPVVEAALNDFIDLILKDFVINMWYSDITPDMEFPEMIRDLIMDAIAEVSVRVKEINLVDLLTRDIVDLIGDHIDLFRRNQDAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLTSGLLTTVLRKREAQCPVIRCIARELLTCLILQPVMNLASPGYINELIESLLLLLNEDGISWLGVCEHSTNTTHNHGHSGAGGGHDNHTGSADWAQMLEAATQRRTEVLTPENLENMWARGRNYRRKQHKSTKSGSQDPSMKCPATDATPEGTCSLHYVGSDPLLNVVGSNRSESAPDADKELCSEVDHHVDEVKDTKDFTSEKYKDLKRSNSASLLGNQHPLKVSSPRSEFHNPESEKHGEGFRGKIGSDMVVKREGHLVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGLEKTWFVRRRYRNFERLHRHLKDIPNYLLHLPPKRIFSSSTEDAFVYQRCIQFDKYLQDLLSIANIAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDGFIRKVVGSSSPTTSTNHNMSWNMDEVDKSVPRQTNAESALSSDNEEGEKEANFGHENIDKEAQENEWNSENELSSKEDSQLLINHDNESANLDLDRKHDVPMEAKVGKDVPATNFNPVPDNMEDPVGVPPEWTPPNVTVPILNLVDNVFQLKKRGWLRRQVFWISKQILQVVMEDAIDDWILREIHWLRREDTIAQGIRWLQDILWPGGTFFLRVQTPQLFIGGSAYYQKPLPSISESGGSRMSKSQSGSFELQLEAIRRANDLKKFLFDGAPTALVGLIGQKQYKRCASDIYYFTQSSICVKQLAYAILELLLISIFPELRNVVISVHENMHVHQPV* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0117 982 Gene3D - 502 616 IPR036871 GO:0035091
Pvu3g0117 982 ProSiteProfiles PX domain profile. 499 611 IPR001683 GO:0035091
Pvu3g0117 982 MobiDBLite consensus disorder prediction 652 720 - -
Pvu3g0117 982 MobiDBLite consensus disorder prediction 468 483 - -
Pvu3g0117 982 MobiDBLite consensus disorder prediction 652 685 - -
Pvu3g0117 982 Pfam Sorting nexin C terminal 800 943 IPR013937 -
Pvu3g0117 982 MobiDBLite consensus disorder prediction 448 483 - -
Pvu3g0117 982 ProSiteProfiles PXA domain profile. 110 293 IPR003114 -
Pvu3g0117 982 PANTHER PX SERINE/THREONINE KINASE PXK 9 981 - -
Pvu3g0117 982 SMART PXA_3 110 293 IPR003114 -
Pvu3g0117 982 PANTHER SORTING NEXIN CARBOXY-TERMINAL PROTEIN 9 981 - -
Pvu3g0117 982 SMART PX_2 497 607 IPR001683 GO:0035091
Pvu3g0117 982 Pfam PX domain 530 606 IPR001683 GO:0035091
Pvu3g0117 982 MobiDBLite consensus disorder prediction 686 720 - -
Pvu3g0117 982 Pfam PXA domain 110 288 IPR003114 -
Pvu3g0117 982 SUPERFAMILY PX domain 501 608 IPR036871 GO:0035091
Pvu3g0117 982 MobiDBLite consensus disorder prediction 449 464 - -
Pvu3g0117 982 MobiDBLite consensus disorder prediction 361 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0117 Pvu-Chr3 1054609 1067305 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0117 K17925 - gmx:100804013 1592.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0117 3 1054609 1067305 Pvu3g0117 3 1054609 1067305 ECH