Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0115 ATGGCCATGGCTAGTGCAGCAACTCCAGCCACAATCACTGTTGTGGGCAGCTCCAGTGTTGGCAGCAGAAGAAGAAGGGAGAGGAGTGTGAACTTCATCAGAGGGGTGAACCATTTTGGAGGGTTGAAGGCTCAGAACAGTGTGACATCATTAGGGCTTCCTGTGTGCACTGAGCAGTGCTTTGCAAAGGTGGTGAGCTCATTGAAATATCCATCTAAGGGCAGAAGAGGAGGTGCTGCCTCCTCAACCTGCAATGCTGCTGGTGAGATTTTCCAAATTGCTGGCATCCTGAGTGGGCTTGTTCTTGTTGGGGTTGCAGTAGGATTTGTCCTTCTTCGAATTGAAGCATATGTGGAAGAGACTGAGTGA 369 0.4986 MAMASAATPATITVVGSSSVGSRRRRERSVNFIRGVNHFGGLKAQNSVTSLGLPVCTEQCFAKVVSSLKYPSKGRRGGAASSTCNAAGEIFQIAGILSGLVLVGVAVGFVLLRIEAYVEETE* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0115 122 SUPERFAMILY PetM subunit of the cytochrome b6f complex 87 119 - -
Pvu3g0115 122 Pfam PetM family of cytochrome b6f complex subunit 7 88 115 IPR012595 GO:0009512
Pvu3g0115 122 Hamap Cytochrome b6-f complex subunit 7 [petM]. 86 119 IPR012595 GO:0009512
Pvu3g0115 122 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0115 Pvu-Chr3 1043561 1044620 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0115 - - vun:114173048 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0115 3 1043561 1044620 Pvu3g0115 3 1043561 1044620 ECH