LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g0112	ATGGCTTCTCTTCTGAGAAAGCTAATGCCTTCTTCTGTGCCTGTTGCTGCCGTGGATACTGAAGACAGCATAAGCAGCAGCTATGAGTACTCCATTGCTATGCTGTATAATGGCCCTCCTCTCTGTCACTCCATTCCTGAAATCCCTGCTTTCAAAATTGACCAAATCCCAGTTGCAACCATTGCTGCTCTCTCTCATGATGACTTCTCTGTCCCAGTAATCCAACCTCTTGGCAAAAGCCTTTACAAGAGGAAGCAGAACCTTTGTTCAGCAGATTCTGCTGTCCCTTCAAGCTTGGATTCTGGTGCAAATGACTCACCAACACTATTGTCTGGTACTGATGGGGATGACATGCATGAGAGTTTGGAGTCTTTGAAAGTGCCCGGTGATAAAGATGGTGCCTTTCTTAACACCACAGAATCAGGTTCAGGTTCAGGTTCAACCTCTTTTTCTGCCACCTCTGATGGGATTTGTTCTCTGGGAGAAGCAGAGCAAACAACAAGTCCGAAGCATGTGAGGCGTGTTTCTGCAGTGACCTTCTGTGATCCTGAGTCAAACTACATGTTGGAGAGTGAAAGTGATGAGTTTGGTGATTCTCAGGTTGAGAGTGCTCCTGTGATGGAATGTGCAGTGAGACCTGGGAAGAAGGGTTCTTGCTATAAGTGCCTCAAGGGGAACCGATTCACACCGAAGGAGGTTTGCATTGTCTGCAATGCAAAGTACTGTCGCAGCTGTGTGGTGAGAGCCATGGGGTCCATGCCACAGGGAAGAAAATGTGTGACTTGCATTGGATACAGAATTGATGAGAGCAAGAGGAGGAAACTGGGGAAATCTTCGTGGATTATGAAACAGTTGCTGTCTGAGTTTATTGTGGCTCAAGTCATGGATAATGAGAAGTCTTGTGAAGAAAATCAAATACCACCAGAGCTTGTTTTTGTCAACTCGCAACCTCTGAATCGGGAACAGCTTTTGTTGCTGCTAAACTGTCGAAATCCCCCAAAACAACTTAAACCAGGATCCTATTGGTATGATAAAGCATCAGGACTTTGGGGAAAGGAAGGTCGACCACCCAGTGAGGTTATCAGTCCTCAGCTGGATGTGGGGGGTCGCTTGAACAAGCATGCAAGCAATGGAGACACAAATGTGATTATAAATGATCGTCTGATTACAAAAAAAGAGCTATTTGTACTGAAGTTGGCTAGAGTGCCATGTGAGGGAACACCAAACTTTTGGGTGAATGCTGATGGATCATACAGGGAAGAGGGACAGAGGAATGATAGGGGCTGTATATGGGAAAAGCGCAGAACAAGGTTGGCTTGTGCAATTCTGTTTTTGCCAGTTCCTTCTAGGTCTGCAACTCTTTCTTGTGAAGGTGAAACACCAAACAAAGACAGTCTTCCTCGGAAAATACTTCACAAATTTCTACTTGTTGGTTCTGTCAATTCTGGTGCATCTACTATATTTAAACAGGCCAAGCTTCTGTATAATGTGCCTTTCTCTGAAAATGAGCTCCAAAATATCAAGTTGGTGATCCAAAGCAACCTGTTTACCTACCTTGGTATACTGCTGGAGGGGCGTGCAAATTTTGAAACAGAGAGTTTGTTGGAGAATAGAAGAAAAAGGCCTGTGGCTGAATCCACTTCATCAGGGAATATCAGCAGTGATGATGTTGAAACAACACCCTATTCCATTGGCCCACGTCTGAAAGCTTTCTCAGATTGGCTACTCAAATACATGGTCTCCGGTAACCTGGATGCAATATTTCCTGCTGCTATACGTGAATATGGACCACTTGTGGAAGGTGTGTGGAAGGATAAAGCCATTCAAGCAACGTATGAGCGGCGAAATGAACTAGAAATGCTACCTAGAAGTGCAAACTATTTTTTGGACCGTGCTGTTGAAATTTCCAGGACAGACTATGAGCCATCTGATATGGACATCTTGTATGCAGAGGGCATATCATTATCCAACAGCCTCACTTCAATGGAATTTTCTTTTCCCAGATTAAGCCGTGAAGACTCTTTGTGTCTTGAGTATCAACATGACTCTTCTCTCAGATACCAACTGATCAGATTACATCCTAAAAGCCTTGGAGCAAAGTGCAAGTGGTTGGAGATGTTTGAAGACACAGATGTTGTAATGTTCTCAGTTGCTTTATCTGACTATGATGAGTACATTACAGACAGTGAAGGGGTTTCTACCAACAAAATGTTGGTAGCCAAGGCTCTCTTTGAAAACATCATTGCACATCCATCCTTCCATAACAAAAAATTTCTCCTAGTACTCACCAAATTTGATCTACTTGAGGAAAAGATTGAACACATTCCTCTAGCACAATGTGAATGGTTTAGTGATTTCAAACCATTTATCAGTCACAATATGAAGAAAGGTTGTGGCAATGGCAATAACCCTTTGTTAGCTCAATCTGCTTTTCAATACATTGCTATCAAGTTTAAGAGATTGTTCCATTCTCTCACTCACCGAATCCTCTTTGTTTCACTGGTTAATGGGTTGGAACCTGATACTGTTGATGAAGCTCTCAAAAATGGAAGGGAGGTTATGGAGTGGGAAAAATGGGACCCCTCTATTGTAACAGATCCAAAGTCTGAGATGACATCAACAAGCATTGAGGGGCCAAGTTACACATAA	2649	0.4319	MASLLRKLMPSSVPVAAVDTEDSISSSYEYSIAMLYNGPPLCHSIPEIPAFKIDQIPVATIAALSHDDFSVPVIQPLGKSLYKRKQNLCSADSAVPSSLDSGANDSPTLLSGTDGDDMHESLESLKVPGDKDGAFLNTTESGSGSGSTSFSATSDGICSLGEAEQTTSPKHVRRVSAVTFCDPESNYMLESESDEFGDSQVESAPVMECAVRPGKKGSCYKCLKGNRFTPKEVCIVCNAKYCRSCVVRAMGSMPQGRKCVTCIGYRIDESKRRKLGKSSWIMKQLLSEFIVAQVMDNEKSCEENQIPPELVFVNSQPLNREQLLLLLNCRNPPKQLKPGSYWYDKASGLWGKEGRPPSEVISPQLDVGGRLNKHASNGDTNVIINDRLITKKELFVLKLARVPCEGTPNFWVNADGSYREEGQRNDRGCIWEKRRTRLACAILFLPVPSRSATLSCEGETPNKDSLPRKILHKFLLVGSVNSGASTIFKQAKLLYNVPFSENELQNIKLVIQSNLFTYLGILLEGRANFETESLLENRRKRPVAESTSSGNISSDDVETTPYSIGPRLKAFSDWLLKYMVSGNLDAIFPAAIREYGPLVEGVWKDKAIQATYERRNELEMLPRSANYFLDRAVEISRTDYEPSDMDILYAEGISLSNSLTSMEFSFPRLSREDSLCLEYQHDSSLRYQLIRLHPKSLGAKCKWLEMFEDTDVVMFSVALSDYDEYITDSEGVSTNKMLVAKALFENIIAHPSFHNKKFLLVLTKFDLLEEKIEHIPLAQCEWFSDFKPFISHNMKKGCGNGNNPLLAQSAFQYIAIKFKRLFHSLTHRILFVSLVNGLEPDTVDEALKNGREVMEWEKWDPSIVTDPKSEMTSTSIEGPSYT*	883

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g0112	882	ProSiteProfiles	G-alpha domain profile.	470	865	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	469	839	IPR027417	-
	Pvu3g0112	882	MobiDBLite	consensus disorder prediction	136	150	-	-
	Pvu3g0112	882	PRINTS	Alpha G protein (transducin) signature	473	488	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	PRINTS	Alpha G protein (transducin) signature	640	662	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	PRINTS	Alpha G protein (transducin) signature	710	738	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	PRINTS	Alpha G protein (transducin) signature	758	767	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	Gene3D	-	500	648	IPR011025	GO:0007165
	Pvu3g0112	882	Pfam	G-protein alpha subunit	470	853	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	SMART	galpha_1	448	848	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	MobiDBLite	consensus disorder prediction	93	150	-	-
	Pvu3g0112	882	MobiDBLite	consensus disorder prediction	93	111	-	-
	Pvu3g0112	882	Gene3D	-	649	861	IPR027417	-
	Pvu3g0112	882	CDD	G-alpha	472	829	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	PANTHER	EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2	20	876	-	-
	Pvu3g0112	882	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	20	876	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Pvu3g0112	882	SUPERFAMILY	Transducin (alpha subunit), insertion domain	499	650	IPR011025	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g0112	Pvu-Chr3	1029900	1035237	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g0112	-		-	gmx:112997598	1387.86

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu3g0112	3	1029900	1035237	Pvu3g0112	3	1029900	1035237	ECH