Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0109 ATGCCAGAGGTTTTCACTGTGAAGGTTGAGGAGGGAAGTCCTGCAACTGATGGAAAGCCATCAGCAGGTCCTGTGTACAGAAGCATTTATGCTAAAGAGGGTCTCTTGGAGGTTCCTTCTGATTTGGAGTCCCCTTGGGATTTCTTCAGGGACTCTGTTAAAAGGAACCCCAACAGTAAAATGCTTGGTAGGCGTCAAAAAACAGAATCTAAGGTGGGTTCCTATGCATGGCTTACATATCAAGAGGTTTATGATGCTGCCTTGAAAATGGGTTCTGCCATGAGGAGCCGTGGTGTCAATCCAGGAGATCGTTGTGGCATATATGGCTCCAACTGTCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAGTGTCATATGTTCCCCTATATGACACCCTTGGTCCTAATGCTGTGGAGTTCATCATAAATCATGCAGAAGTTTCAATTGCATTTGTTCAGGAAAAAAAAATTCCATCAGTTTTGTCATGTCTTGTGCAGTGTTCTTCAAATCTTAAAACTATTGTGAGCTTTGGAAGTGTTTCGACCACACAAAAGAAGGAAGCTGAGGAGCATGGTGCCTCCTGCTTCTCATGGGGAGAGTTTCTCTTGTTGGGATGTCTGGATTGGGATTTACCATCGAAAAAGAAGACAGACATTTGCACAATAATGTACACGAGTGGAACAACTGGCGATCCCAAAGGTGTTGTTATTAAGAATCAAGCTTTCATGGCTGAAGTGTTGTCTGTTGACCACATAATTATGTTAACAGACAGAGTGGCAGGAGAAGACGATGTGTACTTCTCATTTCTTCCTCTTGCTCACGTATATGACCAAATAATGGAGACTTATTGCATCTCCAAGGGCTCAGCAATAGGATTTTGGCAAGGAGATGTGAGGTTCTTGCTGGAAGATGTTCAGGCACTACAACCAACTATATTCTGTGGTGTTCCTAGAGTTTTTGATCGTATTTGTGCTGGTATCAAAAGCAGACTTTCTTCAGCAGGAGCACTGCAGAGTACTCTGTTTCAGTGTGCTTACAACTACAAGTTAAAGTATCTTGAGAAGGGTCTTCCACAACACAAAGCAGCACCTCTGTTCGATAGGCTTGTGTTTGACAAGACAAAACAAGCACTGGGTGGACGTGTACGCATCCTGTTATCTGGAGCTGCTCCTTTGCCTAGGCACGTGGAAGAGTTCATGAGGGTCACTAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCTGGGTGTTTCACAGCCATAGGTGATGTGTATTCCATGACAGGAACAGTTGGTGTTCCCATGACAACCATTGAAGCCAGGCTTGAATCTGTGCCAGAGATGGAATATGACGCTCTCTCCAATGTAGCCCGGGGAGAAATTTGTCTGAGAGGAAACACCTTGTTCTCTGGTTATCACAAGCGTGAAGATCTGACCAAAGAAGTTATGGTTGATGGTTGGTTTCACACAGGAGACATTGGAGAGTGGCAACCAAATGGAGTCATGAAAATTATTGATAGGAAGAAGAATATCTTCAAACTATCTCAAGGAGAATATGTTGCTGTGGAGAATATTGAAAACAAGTATTTGCAATGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCATTCTTGGTGGCCGTTGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCACTAGTGCACAATGTGAGTGATGATTTTAAATCATTATGTGATAATCTAAAAGCAAGAAAGTACATTTTGGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGATTTGAGCTGCTAAAAGCCATTCATCTGGAATCAAATCCCTTTGACATGGAGAGAGATATAGTAACTCCAACTTTCAAATTGAAGAGACCACAATTGCTCAAGTACTATAAGGATCACATTGATCTACTATACAAAGAAGCAAAGGGAGCAATGCAGTGA 1983 0.4286 MPEVFTVKVEEGSPATDGKPSAGPVYRSIYAKEGLLEVPSDLESPWDFFRDSVKRNPNSKMLGRRQKTESKVGSYAWLTYQEVYDAALKMGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSCAVSYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIPSVLSCLVQCSSNLKTIVSFGSVSTTQKKEAEEHGASCFSWGEFLLLGCLDWDLPSKKKTDICTIMYTSGTTGDPKGVVIKNQAFMAEVLSVDHIIMLTDRVAGEDDVYFSFLPLAHVYDQIMETYCISKGSAIGFWQGDVRFLLEDVQALQPTIFCGVPRVFDRICAGIKSRLSSAGALQSTLFQCAYNYKLKYLEKGLPQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLESVPEMEYDALSNVARGEICLRGNTLFSGYHKREDLTKEVMVDGWFHTGDIGEWQPNGVMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKAIEDWALVHNVSDDFKSLCDNLKARKYILDELNSTGQKHQLRGFELLKAIHLESNPFDMERDIVTPTFKLKRPQLLKYYKDHIDLLYKEAKGAMQ* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0109 660 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Pvu3g0109 660 SUPERFAMILY Acetyl-CoA synthetase-like 41 652 - -
Pvu3g0109 660 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 656 - -
Pvu3g0109 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 656 - -
Pvu3g0109 660 Gene3D - 33 514 IPR042099 -
Pvu3g0109 660 Pfam AMP-binding enzyme C-terminal domain 532 600 IPR025110 -
Pvu3g0109 660 CDD LC-FACS_euk 73 653 IPR045311 GO:0004467|GO:0006631
Pvu3g0109 660 Pfam AMP-binding enzyme 51 522 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0109 Pvu-Chr3 1000880 1008491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0109 5 653 Acyl Lipid Metabolism Gene Families AT4G23850 57.231 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0109 K01897 - gmx:100779735 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0109 3 1000880 1008491 Pvu3g0109 3 1000880 1008491 ECH