Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0108 ATGTATAACAAGTCCAATTTCCAAAACCCTAAACACCAAAAACACGATGATGATGAACATGAAACGACAGCCACCAAGAAATTGAGTGAGATATCTCACTTCAGCCACAAACAACACAAGCTAACGTTTGACTACTCCGAATCTCCCTTCCAATGTGACGGCTGCAAGGAACTGGGCATAGGGTCACGCTATAGCTGCTCCCTCTGCGACTTCGATCTCCACACTCACTGTTCCATTCCTTCTCCTTCACTCTTCCACCCTTTCTACCCCAAATGCTCCTTCCACTTCCTCTCTCACCCTCCCGGCGACACTCCCCGCTACTGCAACGCCTGCCAGAAGCCCCTCAAGGGCTTCCTCTACCACTGCTTCTCCTGCGGCTTCGACCTCCACCCTTGTTGCGCCAAGCTGCCCACGGTCATCGCCGGTGATAACAATGAGGTCAGGCTGCTCCTGTACCGGACGGTGAGGTCGGCATGCCACCGCTGCGGGCAGAAGGGCAGGGGGTGGAGCTACAGGTCCTCATGCAAGAGGTATAACTTGCATGTGGCGTGTGTGAGGGAGATGGTGGTGGAGAGTTGGCATGAGGGTAAGGGGTTGAAGAGCGTGGTCGAGAGTGGCTGCCACAAGGGGAGAGGGGGAAAAGGTGGCAGGGTGAAAAGGTGCTGTGAGTTCGCCGGAGTGGCCGTGCAGGTGGCGGTGTCGGCGGTGCTTGGTGATCCCACCGCTCTTATCGCCGGCATCGTGGGGTCGTTGGTCTCGCGAACTTGA 768 0.5625 MYNKSNFQNPKHQKHDDDEHETTATKKLSEISHFSHKQHKLTFDYSESPFQCDGCKELGIGSRYSCSLCDFDLHTHCSIPSPSLFHPFYPKCSFHFLSHPPGDTPRYCNACQKPLKGFLYHCFSCGFDLHPCCAKLPTVIAGDNNEVRLLLYRTVRSACHRCGQKGRGWSYRSSCKRYNLHVACVREMVVESWHEGKGLKSVVESGCHKGRGGKGGRVKRCCEFAGVAVQVAVSAVLGDPTALIAGIVGSLVSRT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0108 255 SUPERFAMILY Cysteine-rich domain 88 140 IPR046349 -
Pvu3g0108 255 MobiDBLite consensus disorder prediction 9 23 - -
Pvu3g0108 255 Pfam C1 domain 34 78 IPR004146 -
Pvu3g0108 255 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 35 92 IPR002219 -
Pvu3g0108 255 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 17 254 - -
Pvu3g0108 255 MobiDBLite consensus disorder prediction 1 23 - -
Pvu3g0108 255 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 17 254 - -
Pvu3g0108 255 SUPERFAMILY Cysteine-rich domain 23 88 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0108 Pvu-Chr3 996394 997513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0108 - - gmx:100795400 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0108 3 996394 997513 Pvu3g0108 3 996394 997513 ECH