Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0104 ATGAACGAAAATGAAGAAAAAGTTTTACCTTCTTTTGTGTTCACAAATTTTCTAAATGGAGTTATTGTGCTGGCAGTTTATGGAGTGGAATATGCATTTGGAGCCCATGACTATTCAACAAGTGGTGTCTTTGAGGTTGAACCTCGGCAATGTCCTGGCTTTAAGTTTAGGAAGTCCATATTCATGGGAACTACTAGCTTAGATCCTTTCCAGATTAGAGAGTTCATGGAACGCCAGTCTGCAAATTACATGCTAACGGGAAATTCTAATCCAAAATGGGTCAATCGTCTCGCAAGAATAGGTCCCTTTTGCAACTGCATACTCCCTGATGCTCTTAAAACTTCAACTGTTCAGTATGATCCTAACTTTCAAGCGTGTGATAGTGAGAAAAGAAGACTCATAACTGCTTTCAGTTGCTTGTCATCAATTTCAATGCCTCAGAAGGAAGTTTCAATGTCTTCATTATTTATGCACTCTCACTATAAAGGGTGCCTACCACCATGGGAGTTAAAGAAGTCTAAAAAGGGAAGATTAAAGCAAAAGTTAGATGAATAG 555 0.3856 MNENEEKVLPSFVFTNFLNGVIVLAVYGVEYAFGAHDYSTSGVFEVEPRQCPGFKFRKSIFMGTTSLDPFQIREFMERQSANYMLTGNSNPKWVNRLARIGPFCNCILPDALKTSTVQYDPNFQACDSEKRRLITAFSCLSSISMPQKEVSMSSLFMHSHYKGCLPPWELKKSKKGRLKQKLDE* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0104 184 PANTHER DESUMOYLATING ISOPEPTIDASE 83 180 IPR008580 GO:0008233
Pvu3g0104 184 PANTHER DESUMOYLATING ISOPEPTIDASE 24 83 IPR008580 GO:0008233
Pvu3g0104 184 Gene3D PPPDE domains 13 84 IPR042266 -
Pvu3g0104 184 SMART DUF862_2a 6 113 IPR008580 GO:0008233
Pvu3g0104 184 Pfam PPPDE putative peptidase domain 24 83 IPR008580 GO:0008233
Pvu3g0104 184 PANTHER DESI-LIKE PROTEIN 83 180 - -
Pvu3g0104 184 PANTHER DESI-LIKE PROTEIN 24 83 - -
Pvu3g0104 184 ProSiteProfiles PPPDE domain profile. 1 112 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0104 Pvu-Chr3 970270 972322 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0104 - - pvu:PHAVU_003G010100g 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0104 3 970270 972322 Pvu3g0104 3 970270 972322 ECH