Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu3g0075 | ATGGGTTTGGAAGTAGAAGAATCCATAAGAACAACAACACAATCCACAGAACCAGAAACGCCGTCGTCGCAAAAGATTCTAAACAAGGTAATCCTGCAGCCTCACGCGCTTCTTCCGAAGCCCGTGCCCCCAACCGCATCGCACCGAAAGGACGTCGATGTTTCCACCGCATTCGGCAACTTCTTTCACCAGCGCCGCCACGTGCTGTCATCCGCGATCTCGCGTGGAATTTCCACGCTGAAGCGCCACAACGACGATGCCTCCAAGAAGAACAAGAACGACGGCGTGACGGAGTTCGATCTCTCGGGACTGAAGGTCTTCGTGGCGGTGAGAAACGACGTATCGGTCCTGCCGCGGCGGATCAGCTTCTTCTCGCGCTCAAACTGCAGAGAGTGCGGTGCGGTGCGGAGCTTCTTCAGAGAGAGAGCGCTGAGGTTCGTGGAGATAAACGTGGACGTGTTCGCGGAGCGGGAGAAGGAGTTGCTGGAGAGAACGGGGAGCGCGACGGTGCCGAAGATTTTCTTCGGCGATAAGCTAATCGGAGGGCTGGTGGAGCTCAACGCGCTGCGGAAGGACGGCAATAAGGAGTTGGAGAGGCGGCTAAAAGAGGCCGAAGGGGAAGGGCTGGCGGCTCCGGCGTACGGGTTCGACGAGGCGGCGGAGGAGGTGGAGGAGGAGGAAGCAGTGGAGGAAGTTTTGAAGGTGGTTAGGGTTTTGAGACAGAGGTTGCCGATTCAGGACAGAGTGTTGAAAATGAAGATTGCGAGGAACTGCTTCGCCGGAAGCGAGTTGGTGGAGCTTCTGGTTCGCCACCATGGCTACGCTCTTACCAAGGCTGTTGAGATTGGAAAACAGTTATGCAAGAAGCACTTCATCCACCATGTTTTCGGGGAAAATGATTTTGAGGAGGGAAACCACTTCTATAGATTCGTTGAGCACGAACCCTTCATCTCCAAATGCTTTAACTTCCGTGGTGCCACAAATGATAGTGAACCGAAGGCTGCAGCTGCAGTGTGTGATAGGCTCACCAAGATTATGTTTGCTATTCTTGAGTCTTATGCTTCTGAAGACAGGCAACGTGTTGATTATGTGGCCATTGGCAAAAGTGAAGAATTTCGTAGGTATGTAAACATGACCCAAGATCTGCAGCGGGTGAATCTCTTGGAACTATCAGAAAACGAGACGCTTGCCTTCTTCTTAAATTTGTACAATGCCATGATCATTCATGCTATCATTAGAGTCGGGTGTGAAGAAGGTGTGATTAATAGGAGATCCTTCTCTGATTTCCAGTACTTGATTGGAGGGCACTCTTATTCTCTTAGTACCATTAAAAATGGTATCCTCAGAAGCAATCGGAGGTCACCATACTCCTTAATTAAGCCATTTGGTTCAGGAGACAGGCGCTTAGAGCTTGCTCTTGTAAAATTGAATCCGTTAGTTCACTTTGGCCTCTGTAATGGCACGAAGTCGAGCCCAAAGGTGAGGTTTTTCTCACCCTATAGAGTAGCAGAAGAATTGAGATGTGCAGCTAGAGAGTTTTTTGAAAATGATGGAATTGAAGTGGAGTTGGAGAAGAGGACAATTCATATCACTCCAATTTTCAAGTGGTACTCTGGGGATTTCGGACAAGAGATAAACATGTTAAAGTGGATAATAAATTACTTGGATGCAAATAAAGCAGGTCTTTTGACACATCTCTTAGGTGATGGTGCTCATGTTAATGTCTCCTACATGAGCTATGATTGGTCAATAAATTCCTGA | 1761 | 0.4878 | MGLEVEESIRTTTQSTEPETPSSQKILNKVILQPHALLPKPVPPTASHRKDVDVSTAFGNFFHQRRHVLSSAISRGISTLKRHNDDASKKNKNDGVTEFDLSGLKVFVAVRNDVSVLPRRISFFSRSNCRECGAVRSFFRERALRFVEINVDVFAEREKELLERTGSATVPKIFFGDKLIGGLVELNALRKDGNKELERRLKEAEGEGLAAPAYGFDEAAEEVEEEEAVEEVLKVVRVLRQRLPIQDRVLKMKIARNCFAGSELVELLVRHHGYALTKAVEIGKQLCKKHFIHHVFGENDFEEGNHFYRFVEHEPFISKCFNFRGATNDSEPKAAAAVCDRLTKIMFAILESYASEDRQRVDYVAIGKSEEFRRYVNMTQDLQRVNLLELSENETLAFFLNLYNAMIIHAIIRVGCEEGVINRRSFSDFQYLIGGHSYSLSTIKNGILRSNRRSPYSLIKPFGSGDRRLELALVKLNPLVHFGLCNGTKSSPKVRFFSPYRVAEELRCAAREFFENDGIEVELEKRTIHITPIFKWYSGDFGQEINMLKWIINYLDANKAGLLTHLLGDGAHVNVSYMSYDWSINS* | 587 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu3g0075 | 586 | PANTHER | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE | 29 | 586 | - | - | |
| Pvu3g0075 | 586 | Gene3D | - | 225 | 361 | IPR036388 | - | |
| Pvu3g0075 | 586 | MobiDBLite | consensus disorder prediction | 7 | 23 | - | - | |
| Pvu3g0075 | 586 | PANTHER | DISHEVELLED/EGL-10/LECKSTRIN DOMAIN PROTEIN | 29 | 586 | - | - | |
| Pvu3g0075 | 586 | Coils | Coil | 187 | 207 | - | - | |
| Pvu3g0075 | 586 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Pvu3g0075 | 586 | Pfam | Protein of unknown function, DUF547 | 389 | 513 | IPR006869 | - | |
| Pvu3g0075 | 586 | ProSiteProfiles | Glutaredoxin domain profile. | 109 | 208 | - | - | |
| Pvu3g0075 | 586 | SUPERFAMILY | "Winged helix" DNA-binding domain | 230 | 328 | IPR036390 | - | |
| Pvu3g0075 | 586 | PRINTS | Glutaredoxin signature | 121 | 139 | IPR014025 | - | |
| Pvu3g0075 | 586 | PRINTS | Glutaredoxin signature | 163 | 176 | IPR014025 | - | |
| Pvu3g0075 | 586 | PRINTS | Glutaredoxin signature | 177 | 190 | IPR014025 | - | |
| Pvu3g0075 | 586 | ProSiteProfiles | DEP domain profile. | 239 | 312 | IPR000591 | GO:0035556 | |
| Pvu3g0075 | 586 | SUPERFAMILY | Thioredoxin-like | 120 | 202 | IPR036249 | - | |
| Pvu3g0075 | 586 | Pfam | Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) | 243 | 310 | IPR000591 | GO:0035556 | |
| Pvu3g0075 | 586 | CDD | DEP | 233 | 309 | - | - | |
| Pvu3g0075 | 586 | SMART | DEP_3 | 239 | 312 | IPR000591 | GO:0035556 | |
| Pvu3g0075 | 586 | Gene3D | Glutaredoxin | 119 | 205 | - | - | |
| Pvu3g0075 | 586 | Pfam | Glutaredoxin | 123 | 180 | IPR002109 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu3g0075 | Pvu-Chr3 | 673806 | 678887 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu3g0075 | - | - | pvu:PHAVU_003G007200g | 1130.55 |
Event-related genes