Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0057 ATGTTGAAGTGTGGGTTGAAATACGCGATGGAAAGGGAAAAGTGGAAGGAGAATTGCAATGGCAATGGCAACAGCAACGGCAATGGATACTATTACGATAGGTTTGTGTGTGATTATTACGACGGAGAGGTACAGAGCGAAGAACGGAGTCCGGCGAAGCCTTCTTCGCTGTCTTCTTCGCCTCCCAGAGTTGGATACATTGAACACTATGTTTCAAAATTTGATACCTTGGTTGGTGTTGCTATCAAGTATGGTGTTGAGGTTGCAGATGTCAAAAAGTTGAATAACCTTGTTACAGACCATCAAATGTTTGCTCTTAAAACTCTCCACATTCCGCTACCTGGAAGGCATCCTCCATCTCCTTGTTTATCAAATGGTTCCAGTACTCCTGGATATGGTAATTCAGATCAAAGTTCTCCTACTCACGCACTCCATGATCTGCTTGATTCATTCCAATCCCTGAAAATAAAGTCATCTGACCGGAAGGTCTCACCAGCCATGAGCTCATTCCAGGGTTACTATGGACTAAAAGGGTCCTCAAGTCCCTCAGAAGATGGTTTCCCCAGAAACACACCTATGTCTGACAGACCACTCAGTAGTCATCGGAAATCTAAAAGCTTGGTCAATGTAATTTTGGAAGAGATTATGGAAAAATCAAATGATGCATCAGCTGCAATAATCGGGGAAGTTGACTCCGGTAAATGTAATTACAAACTTGTCCAGAGACGTCAGAAATCTGTAGCTGACTTTAGCAGGATACCAGAGTTGCTTCTAAGGGAGGATAATAACAGCACTGGTGTTCTTCCTACAAGAACTGGAAAGGGCTTAGCTCTGAGACAGAAAGCAGCTAGCCGAACCACATTGGCAACTGATTCTGAACAAAATGGTTTGAATCCTGTGGCAATGGGTATGGGGGATGCTACACTAAATGAAGGTTCATCTAGGGTGAGGAAATCATCAAGTACTTCCTGTTTACAGGATCAAGATAACAGTGGCTCCTCATCCATTTGGCCAACCGCAATGTGGAATTTGAAACCAGATTTGCAGTCCCTCTCAACTGCATCCATTGGAAAATCAATCTTTGATGGCTTGCCCAAACCAACAACTGGTCGAAAAAATAAAGCTGCACTTGATTAA 1137 0.4318 MLKCGLKYAMEREKWKENCNGNGNSNGNGYYYDRFVCDYYDGEVQSEERSPAKPSSLSSSPPRVGYIEHYVSKFDTLVGVAIKYGVEVADVKKLNNLVTDHQMFALKTLHIPLPGRHPPSPCLSNGSSTPGYGNSDQSSPTHALHDLLDSFQSLKIKSSDRKVSPAMSSFQGYYGLKGSSSPSEDGFPRNTPMSDRPLSSHRKSKSLVNVILEEIMEKSNDASAAIIGEVDSGKCNYKLVQRRQKSVADFSRIPELLLREDNNSTGVLPTRTGKGLALRQKAASRTTLATDSEQNGLNPVAMGMGDATLNEGSSRVRKSSSTSCLQDQDNSGSSSIWPTAMWNLKPDLQSLSTASIGKSIFDGLPKPTTGRKNKAALD* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0057 378 ProSiteProfiles LysM domain profile. 67 111 IPR018392 -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 312 332 - -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 359 378 - -
Pvu3g0057 378 CDD LysM 75 111 IPR018392 -
Pvu3g0057 378 Gene3D LysM domain 54 118 IPR036779 -
Pvu3g0057 378 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 52 378 - -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 117 142 - -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 174 195 - -
Pvu3g0057 378 PANTHER LOC443603 PROTEIN-RELATED 52 378 IPR045030 -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 304 332 - -
Pvu3g0057 378 SMART LysM_2 68 112 IPR018392 -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 174 203 - -
Pvu3g0057 378 SUPERFAMILY LysM domain 67 112 IPR036779 -
Pvu3g0057 378 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0057 Pvu-Chr3 512675 516464 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0057 - - pvu:PHAVU_003G005400g 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0057 3 512675 516464 Pvu3g0057 3 512675 516464 ECH