Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3401 ATGGGATCGGTGGACAAATACACGATTATGACACTCAAAGATGTTTTTAAATCTGTGGATCAGAAAGTAAATGTGGTTGGCGTTGTTCTTGAAACTGGCTTCCCAAAGCCAACAGCGGGCACGGATTTCTGTTCCATCCTCAAAATAATTGATGCCACACATCACGATATGGCCATGACTGTCAACATTTTTGCTGAAAGTACAGAAAAACTTCCCCTTGTTGCTGCTGTTGGGGATGTAATTCAACTTTGTCGTGTCTTGGTAAAAGAACATAATGGGGAAGTAAATGCTGTTTTCAACAAAAAATATTCCTCATTTGCTTTATTTAAAGGCAAAGATGGTGATGATTTATACCCGTATCAAGTTTATTCTAATTTTCACCCCAGATATGTAGACAAGTTGCTCATACATAGGCTGAGAAAATGGCTTGTCAATTTCCAGCTTCATGAAGATTCTAGTAAATTTCCCATGTTCAGAGAAATCAAGGAAGAGACTTACATTAATTTGGCTTGCAAGATCCTTCACTGCTGTGAGGCTGCGAACGATGAATGGTTTATCTTTGCCTGGGATGGTACCGATACCCTACCAAATGCCATATCTTCAAACTTAGAAGATGAACTTAATCATCCACTTCCTTTACAACTGGAACCTTTGCCTTTGCCAAGAGAGATTTTATGTACTTTTCCAGCTGTTGGATCCATCCTGAGAATAACTTTGGAGGAATATGTTGGGAAGAGGCAACTCTACCTTCTAAGCATTGGTAAATGGGTCAAGTTTACGAATATGCGTCTTGAGGTGCGTGATGGACTGTGGCATGGTATTTTTACGCGTTTTACAAAGGTTCGATATACACCAAACGAAGATCTGCTCATTGTAGAACGTCAAAGGTTGTCTGATGAAAGACTATCTCTGAAATCAGGAAGAATGCTTTATTCCAGCTTCCCTGAGCCTTCGCCGATTACAGCTGTCAATTGTCATGATCATGTGACACCTGTTACTTTAATGAGTGTTCTCACTCATTCAGAGGTGACGGCTAATTTCAAGTGTGTTGTTCGGGTAGTAGCAGCAATGCCATGCCAAGCTGAACTTCTCCGCTCTCCTGCTGGGACATATAGAATGCGGCTAACACTAGAGGATTCAACTGCTAGAATCCATGCTTATGTAATTGATGAGGATGGGGAGACCCTTTTTGATGGTTATCCGGGCGTTGAACAGTTGAGAAGGAAGCTGGAGAAATTACTTGGAATAGAATGTGATGGTAGCAAGGATGGGGAAAAGGATACTCCAAGAAATCCACCATGGATTTGTGTTTGTCTCAAGTCATTCTATGTCCAGAAGGCTGATATCTGGGGTACTAGAAACTTCAGAATATTTGGCACCAAAATAGTGGGAGATGCATGA 1401 0.4111 MGSVDKYTIMTLKDVFKSVDQKVNVVGVVLETGFPKPTAGTDFCSILKIIDATHHDMAMTVNIFAESTEKLPLVAAVGDVIQLCRVLVKEHNGEVNAVFNKKYSSFALFKGKDGDDLYPYQVYSNFHPRYVDKLLIHRLRKWLVNFQLHEDSSKFPMFREIKEETYINLACKILHCCEAANDEWFIFAWDGTDTLPNAISSNLEDELNHPLPLQLEPLPLPREILCTFPAVGSILRITLEEYVGKRQLYLLSIGKWVKFTNMRLEVRDGLWHGIFTRFTKVRYTPNEDLLIVERQRLSDERLSLKSGRMLYSSFPEPSPITAVNCHDHVTPVTLMSVLTHSEVTANFKCVVRVVAAMPCQAELLRSPAGTYRMRLTLEDSTARIHAYVIDEDGETLFDGYPGVEQLRRKLEKLLGIECDGSKDGEKDTPRNPPWICVCLKSFYVQKADIWGTRNFRIFGTKIVGDA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3401 466 SUPERFAMILY Nucleic acid-binding proteins 11 146 IPR012340 -
Pvu2g3401 466 SUPERFAMILY Nucleic acid-binding proteins 158 267 IPR012340 -
Pvu2g3401 466 PANTHER PROTECTION OF TELOMERES 1 7 463 IPR028389 GO:0000723|GO:0043047
Pvu2g3401 466 CDD hPOT1_OB1_like 7 142 - -
Pvu2g3401 466 Pfam Telomeric single stranded DNA binding POT1/CDC13 20 143 IPR011564 GO:0000723|GO:0000781|GO:0003677
Pvu2g3401 466 Gene3D - 158 273 IPR012340 -
Pvu2g3401 466 PANTHER PROTECTION OF TELOMERES PROTEIN 1A-LIKE ISOFORM X1 7 463 - -
Pvu2g3401 466 Gene3D - 9 153 IPR012340 -
Pvu2g3401 466 SMART Telo_bind_a_2 9 144 IPR011564 GO:0000723|GO:0000781|GO:0003677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3401 - - var:108333113 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3401 2 48842934 48847483 Pvu2g3401 2 48842934 48847483 ECH