Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3339 ATGTCTCTTCCACCCATAGAGTGTCTGTACGTAACAGAGGACTGTGTTCGCGAATGGAGGACTGCCAACCCTGCCCTCAAGGTCTCCCAAGCTGTCCCCATGCTTCGCTTCCTCTACGAGCTCTGTTGGACTATGGTTAGGGGTGAACTGCCGTTTCCCAAGTGTAAAGTTGCGTTGGATTCTGTCATATTTTCAGAACAAGCTTCCAATGACCAAATAGCTTCGAATTTTGCTGATATAGTGACCCAGATGGCTCAAGATCATACAATGCCTGGAGATTCCCGTTCTCGTCTCATCAAGCTGGCAAGATGGCTTGTGGAATCTGAAATGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAATTCTTGGGGGAGGCTGAATTGATCAAAATTAAGGCTCAGGAGTTGAAGGGTAAAGAGGTCAGAGTTAATACCCGACTTCTCTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTGACTCTTCTTTGCCGGGACTCCGAAGCACCTACACAAAAATCATCCACAGCAACCATTGGCATTATTAAGTCATTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTTGATATTGTCCTAGAGTGTTTTGAACTGCAGCCTGATGATGATGTGTTTATAGAGTTGATTCCTATATTTCCAAAGTCTCACGCGTCACAGATTCTTGGGTTTAAATTTCAATATTATCAACGCATGGAAGTTGGCAGTTCTGTTCCATTTGGGCTATATAGACTCACAGCCTTGCTGGTGAAGCAAGATTTTATTGATCTTGATAGCATTTACGCTCATCTACTTCCCAGAGATGATGAGGCATTTGAGCATTACAATACTTTCTCTTCCAAGCGACTTGATGAGGCTAATAAGATTGGAAGAATAAACCTTGCTGCAACTGGAAAAGATCTAATGGATGATGAGAAACAGGGGGATGTCAGTATAGATCTCTTTGCTGCCTTAGACCTTGAAACAGAAGCAACTGAAGAGCGAACAACTGAGCTTCAAAGCAGTCAGACTCTGGGCTTGCTTACTGGCTTTCTTTCGGTGGATGACTGGTATCATGCACACCTATTATTTGAACGTCTTTCAGCACTCAATGCTGTGGAACATATTCAAATATGTGACAGTTTGTTTAGGCTTATTCAGAAGTCCATTTCTTCAGCATATGATGTTGTCCGTCTGTCACATCTTCAAAATCCTGGATCATCATCAGGAGGCGCTGATGTTATGGATGTCGATAACTCTTCAGGATGCAATTCTTTCATAGATCTTCCTAAGGAACTTTTTCAGATGCTTTCTTGTACTGGACCTTATCTCTACCGTGATACTGTATTGTTGCAGAAGGTTTGTAGGGTCTTGAGAGGTTATTATCTTTCTGCTCTAGAGCTTGTAAGTCGTGGCAATGGTGCCTTGAATCCTCAATTACATGTTCCTGGAAACCCTAACCTACATCTTAAGGAGGCAAAGCTAAGGGTAGAGGATGCTTTAGGGGCATGTGTATTACCTTCTCTGCAGTTAATTCCTGCCAATCCAGCTGTTGGGCAGGAAATATGGGAACTAATGAGTCTTCTTCCTTACGAGGTGCGATATCGATTGTATGGTGAATGGGAAAAAGATGAAGAGCGCATTCCTATGCTTTTAGCTGCAAGACAAACTGCCAAGTTGGACACTAGACGTATTTTGAAACGGCTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAGCCCTATGACTGTCCTCCGAACAATTGTTCATCAGATTGAGGCTTACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTACTTGACTCAGCTCGAGTATGATATATTGGAATATGTTGTGATTGAACGATTAGCACTTGGTGGACGTGATAAGTTAAAGGATGATGGCCTTAATTTGTCAGATTGGCTTCAATCTCTAGCCTCGTTTTGGGGCCATCTGTGTAAGAAGTACCCATCAATGGAATTACGGGGCCTTTTCCAGTATCTTGTGAATCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACAGAGAACTTGACTGAGGAACAGCTTGATGCAATGGCAGGGAGTGACACTCTCAGATATCAAGCAACTTCTTTTGGTGTAACTCGGAATAATAAGGCATTGATAAAGTCAACTAGCAGACTTAGGGACGCATTACTTCCAAAAGATGAACCAAAGTTGGCAATCCCCCTCTTACTTCTTCTTGCTCAGCATCGTTCTCTAGCTGTTGTAAATGCAGATGCACCCTACATTAAGATGGTTAGTGAGCAGTTCGATAGATGTCATGGAACTCTCCTTCAATACGTGGAATTTCTTGGCAGTGCAATCACACCATCATCAAATTATGGCATCCTTATTCCCTCGCTCAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCTTTCTTGATATATCGTCCCGTAATGAGGCTTTTCAAGTCTCAGAGAAATCCTGATGTTTGCTGGCCCTTGGATGATAAACATGCTGCAAGTGATGGATCTTCTAACTTTGAATCTGATCCTCTGGGTGATTCTGGTAGTATGGTTCTAAATTTTGGCTCTGCTCAAAATCCTATAAGTTGGTCGTATCTTCTTGATACTGTTAAAACCATGTTGCCTCCAAAAGCATGGAATAGCTTATCTCCCGATCTTTATGCAACATTTTGGGGTCTTACATTATATGATCTGTATGTCCCAAAAAATCGATATGAGTCAGAAATAGCCAAGCTGCATGCAAATCTAAAATCTTTGGAGGAGCTTTCTGATAATTCAAGCTCAGCAATTACAAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGTCTGATTAGTGAACTGCATAAACACGAGGAGAATGTTGCATCTGTTCATAGTCGTCTTTCTCGTGAAAAAGACAGATGGTTAAGTTCCTGTCCTGACACCTTGAAGATCAACATGGAGTTTCTTCAGCGCTGTATTTTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTCCACACACTTCATTCCCTTGGAACCCCCTTTTTCAACACAGTCAATCACATAGATGTTTTGATTTGTAAAACCCTACAACCTATGATATGCTGCTGCACTGAATATGAGGCAGGCAGGCTTGGTAGGTTTCTGTATGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCAGGCTTTGCCGTTTACTATAGATATCCAAATAGCCAACGAGTTACATACGGCCAGTTCATTAAGGTACACTGGAAGTGGAGTCAGAGAATCACACGTTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGGAATGCTCTCATAATGTTGACAAAAATTTCTAGTGTTTTCCCTGTTACCCGGAAGAGTGGGATAAACCTTGAGAAGCGAGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTTGCAGCAGCATTGGCTGCTAGGAAGCCTTCTTGGGTTACTGATGAAGAATTTGGTATGGGTTATCTTGAGTTGAAACCTGCACCATCTGGGACTAAATCTTCAGCTGGAAATCCCTCAACTGTACATAGTGGGATGAATCTCAATGTTTCACAAACTGAATCTGCCAGTGGAAAACATGTGGACTCTGGAAACACAGTCAAAGATCAGGTAATAAGAACAAAAACTACCGATGGCAAGTCTGAAAGAACGGAAAGCATGACTGCGACAAAATCTGATTCTGGCCATACAAAAGTCAAGACCGGTGCAATGGTAAATGGATTTGATGGCCAAACATCCTCGATCTCATCTTCTATACAATCTGGGATGTCAAAATCTATGGAAAACTCAAAGCAAGTGGAAGAATTGATAAATAGAGCATCAGATGATCATGGAACAAGAACTGCTGAGTCAAGAGCCTCAGCAAAGCGTTCAGTGCCTACTGGTTCACTTTCAAAACCATCAAAACAAGACCCTTTAAAAGAAGATAGTAGGTCTGGAAAACCTGTTGCTAGAACTTCAGGTTCCTTGAGTAGTGACAAGGATCTACACAGTGGAACTACCAATGTAACTTCTTCAGTCAGTGCTAATGGTAACACCATTACTGGTTCTACTAAAGGTTCAAATGCACCAGTAAGGATTTCATTGGATGGTCCTGGTAATGAGTCAAAGGCCGAGGTTGGAGTTTCCAAGTCTTCTGATATTAGGGCATCTGTGGTGAAGGATGATGGAAATGATACTGCTGATTTAACTAGAGGATCCTCTTCACGCGTAGTTCATTCCCCCAGGCATGAAAACACAGGAGTTGCTTCAAAATCTAATGAAAAAGTTCAGAAGAGAGCCAGTTCTGCTGAAGAACCAGACAGACTAGGTAAACGACGGAAAGGAGATGTTGAGCTAAGAGATTTTGAAAGTGAAGTTCGATTCTCTGATAGAGATAAGTTGATGGATCCTCGCTTTGCTGATGACAAATTGGGACCAGAGGAACATGGTCTGTACAGAGCAGGTGATAAGTCACTGGAACGTCCAAAAGACAAGGGCAATGAAAGATATGAGAGGGACCACAGGGAAAGATTAGACCGCGTAGACAAGTCTCGGGGTGATGACTCTGTAGCTGAAAAACCTAGGGATAGGTCAATTGAAAGATATGGAAGAGAACGATCCGTTGAGAGAATGCAAGAGAGGGGTAGTGAGAGGAGTTTTAATAGACCACCTGAGAAAGCAAAGGATGAAAGAAGCAAGGATGATAGGAACAAATTACGTTACAGTGATGCATCAGTAGAAAAATCTCATGCTGATGATCGCTTCCATGGTCAAAGCTTGCCTCCACCGCCCCCTTTACCTCCTAATATGGTTCCTCAATCCGTAGGAGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCAACGAGGCACTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAGGAACGGAGACGATCGGAAGAGACTGTGGTTTCTCAGGATGATGCCAAACGCCGAAAAGAAGATGATTTTCGAGAACGAAAACGTGAAGAGATTAAGGTTGAAGAGAGGGAGAGAGAAAGAGAGAAAGCAAATGTTCTGAAGGAAGATTTGGATTTAAATGCCGCATCCAAGAGGCGGAAACTTAAGAGGGAGCATCTATCAACTGGTGAACCTGGGGAGTACTCACCTGTAGCTCCTCCACCTCCTCCCACTGGTATTGGTATGCCATTGGGGTATGATGGAAGGGACAGGGGAGACAGAAAGGGACCCGTCATCCAGCATCCAAACTACATAGATGAACCAAATATCAGGATTCACGGTAAAGAGGTGGCCAGCAAGTTGAATCGCCGTGATTCAGATCCCTTGTATGATCGTGAATGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGGCACCGGAAGTAG 5595 0.4279 MSLPPIECLYVTEDCVREWRTANPALKVSQAVPMLRFLYELCWTMVRGELPFPKCKVALDSVIFSEQASNDQIASNFADIVTQMAQDHTMPGDSRSRLIKLARWLVESEMVPVRLLQERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKSSTATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILGFKFQYYQRMEVGSSVPFGLYRLTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKQGDVSIDLFAALDLETEATEERTTELQSSQTLGLLTGFLSVDDWYHAHLLFERLSALNAVEHIQICDSLFRLIQKSISSAYDVVRLSHLQNPGSSSGGADVMDVDNSSGCNSFIDLPKELFQMLSCTGPYLYRDTVLLQKVCRVLRGYYLSALELVSRGNGALNPQLHVPGNPNLHLKEAKLRVEDALGACVLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDEERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHASPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLLAQHRSLAVVNADAPYIKMVSEQFDRCHGTLLQYVEFLGSAITPSSNYGILIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQRNPDVCWPLDDKHAASDGSSNFESDPLGDSGSMVLNFGSAQNPISWSYLLDTVKTMLPPKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHSRLSREKDRWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSGTKSSAGNPSTVHSGMNLNVSQTESASGKHVDSGNTVKDQVIRTKTTDGKSERTESMTATKSDSGHTKVKTGAMVNGFDGQTSSISSSIQSGMSKSMENSKQVEELINRASDDHGTRTAESRASAKRSVPTGSLSKPSKQDPLKEDSRSGKPVARTSGSLSSDKDLHSGTTNVTSSVSANGNTITGSTKGSNAPVRISLDGPGNESKAEVGVSKSSDIRASVVKDDGNDTADLTRGSSSRVVHSPRHENTGVASKSNEKVQKRASSAEEPDRLGKRRKGDVELRDFESEVRFSDRDKLMDPRFADDKLGPEEHGLYRAGDKSLERPKDKGNERYERDHRERLDRVDKSRGDDSVAEKPRDRSIERYGRERSVERMQERGSERSFNRPPEKAKDERSKDDRNKLRYSDASVEKSHADDRFHGQSLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDAKRRKEDDFRERKREEIKVEEREREREKANVLKEDLDLNAASKRRKLKREHLSTGEPGEYSPVAPPPPPTGIGMPLGYDGRDRGDRKGPVIQHPNYIDEPNIRIHGKEVASKLNRRDSDPLYDREWDDEKRQRADQKRRHRK* 1865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3339 1864 Pfam Transcription factor/nuclear export subunit protein 2 920 1214 IPR021418 -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1283 1299 - -
Pvu2g3339 1864 Coils Coil 1732 1761 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1822 1856 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1262 1864 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1472 1500 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1682 1777 - -
Pvu2g3339 1864 Coils Coil 943 963 - -
Pvu2g3339 1864 Pfam Transcription- and export-related complex subunit 591 666 IPR021726 -
Pvu2g3339 1864 PANTHER THO2 PROTEIN 10 1771 IPR040007 GO:0000347|GO:0006397|GO:0006406
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1316 1344 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1345 1361 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1501 1659 - -
Pvu2g3339 1864 PANTHER THO COMPLEX SUBUNIT 2 10 1771 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1262 1282 - -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1362 1378 - -
Pvu2g3339 1864 Pfam THO complex subunit 2 N-terminus 36 413 IPR032302 -
Pvu2g3339 1864 Pfam THO complex subunit 2 N-terminus 428 589 IPR032302 -
Pvu2g3339 1864 MobiDBLite consensus disorder prediction 1392 1434 - -
Pvu2g3339 1864 Coils Coil 971 1005 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3339 K12879 - gmx:100817413 3252.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3339 2 48297997 48322293 Pvu2g3339 2 48297997 48322293 ECH