Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3272 ATGAAGGCTAAGCAGCTAGAACGTTCTCTTGCTGCTGCAAATTTCTTGAATACTCAATCACACTTGTTCAACATCTTCTCTCATGTCCTAGCATTTGCCTCTGGTTTGTTCATTGGAATCACCATCATCACTTTCTCCCTCAAAAGCTTTTCCCTCAACTTTCAATTCCACCACCTCTCCCTTCCATCTTTGCCTGCTCCTCCTTCTTCTGCTTCCATCTCAACCTCACACAATGAGACAAAAGTCACCATCTTTACTCCAAACGAGTCAAGGGGTTTCTTGAGGCCAACCATGGCTATGCATGGCATGACAGAGGAAGAGTTGCTGTGGAGAGCTTCTATGGTTCCTAGGATTGAGGAACTGCCTTACAAACAGACCCCAAAGGTTGCATTTATGTTTTTGACAAAAGGGCCAGTCTTTTTGGGTCCACTCTGGGAGAGATTCTTCAAAGGAAATGAAGGGTTCTATTCTATCTATGTCCATTCCCATCCTTCTTTCAATGACACACTGCCTCAAAGTTCTGTTTTTTATGGCCGCAGAATCCCAAGCAAGGAGGCAAGATGGGGTGAGTTCAACATTGTAGGGGCAGAGAGGCGTCTACTAGCCAATGCACTGCTTGACTTCTCAAACCAACGTTTTGTTCTGCTCTCAGAATCATGCATTCCTTTGTTCAACTTCTCAACCGTCTATAGCTACCTCATGAACTCAACCAAGACCTTTGTGGAAGCCTATGACCTGCCAGGTGCAGTGGGGAGAGGGAGGTACAGCCCCAGAATGAGGCCACTGGTTAGGCTTTCTCAGTGGAGAAAAGGGTCCCAATGGTTCCAAATAGACCGTGCCCTTGCCACTGAGATAGTATCTGACCAACTATACTTCCCCTTGTTCAACAAACATTGCAAAAATGGATGTTATGGTGATGAACACTACTTGCCAACTTTTGTTAGCATCAAGTTTTGGCAGAATAACTCTGACAGAACTTTGACATGGGTTGATTGGTCTAAGGGTGGACCCCATCCAACAAGGTTTATGAGAAGAAATGTAACCATTGAATTTCTGAAGAGGCTAAGGCATGGAAGAACATGTCAGTACAATGGGAAGAGCACCAATATTTGCCACCTGTTTGCAAGAAAGTTCATGCCACAGGCTTTAGATAGATTGCTCAGGTTTGCTCCACAGATAATGCAGTTCAACTGA 1194 0.4472 MKAKQLERSLAAANFLNTQSHLFNIFSHVLAFASGLFIGITIITFSLKSFSLNFQFHHLSLPSLPAPPSSASISTSHNETKVTIFTPNESRGFLRPTMAMHGMTEEELLWRASMVPRIEELPYKQTPKVAFMFLTKGPVFLGPLWERFFKGNEGFYSIYVHSHPSFNDTLPQSSVFYGRRIPSKEARWGEFNIVGAERRLLANALLDFSNQRFVLLSESCIPLFNFSTVYSYLMNSTKTFVEAYDLPGAVGRGRYSPRMRPLVRLSQWRKGSQWFQIDRALATEIVSDQLYFPLFNKHCKNGCYGDEHYLPTFVSIKFWQNNSDRTLTWVDWSKGGPHPTRFMRRNVTIEFLKRLRHGRTCQYNGKSTNICHLFARKFMPQALDRLLRFAPQIMQFN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3272 397 Pfam Core-2/I-Branching enzyme 129 355 IPR003406 GO:0016020|GO:0016757
Pvu2g3272 397 PANTHER CORE-2/I-BRANCHING ENZYME 10 396 - -
Pvu2g3272 397 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 10 396 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3272 Pvu-Chr2 47821096 47824152 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3272 - - gmx:100815747 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3272 2 47821096 47824152 Pvu2g3272 2 47821096 47824152 ECH
Pvu2g3272 2 47821096 47824152 Pvu4g1651 4 43802825 43806084 PCT