Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3267 ATGTGTTCTTCGGAGACCATCAATATTGCTGCGAGTACGCAGAAAGTCGATGTTGATAATCGACTTGCTCTCCGATTCTACTACAGGATCGCTGACAATATCCTCAAACAGGCTGATATCTTTCGTGCAGAAAAAAATATTGTTGATCTATATGTCATGCTCCTAAGATTTTCTAGTTTGGTCTCTGAGACAATACCACGTCACCGAGATTATAGATCATCTCCACAAAGCAAGAAAGAAATTTTGAGAAAGAAATTGTTAAATTCTGTGATTGAGCTGGAGAAATTGAAACCAAAGGTGCAACAGAAGATCAATGAGTTTAACAGCAGGCGAGAATACCACCATCACAAACACAATGGACGGGAGAAATGTCATTCAACTAATTTGATGGTTTCTCCAGTGAAAAAACAAACTTTGGCTAGTTATAATCAAACAAAGGCAATCGTACCAACTACCAGAGAGATTGCTTACCAAGGATCCAGGGGCCAGCAGTTTTCTAGTGTAAGGCCTGTGGAAGAAAATATGAGGAGACTTCTCCTACGTCCAAAGGAGGAAACTCTCTCCAGACATTCTATTCTAGGTCCCAATGGGCTTAAAGGGCAGTGGCGACCACCTGCAAGTGATAAAGGGGTCAGGTATCCAACCATCATAGATTTGTCTCCAGTTGAAATTCCAAGCCTTCAGCAACCCTTGGAAGATGGATCTCTGAGTGATAAAGATAATAGCATTTCAGAACAACATAGATCAGATTTAGAATCATTTGTTACCCAGAGTGACAACTCCCGGGAAAAGCATGCTGATGAAGCTCCTTCTCTTATCTCTTTTGAAGCAACAGAAATCCCTACTCAAATAGAAGTTATCAGACAGCCTTCTCCTCCACCCGTACTTGCTGAAGTACAAGATTTGATTCCAGCAGTGTCACCTCATGTTATTGAGGAAGGATGTAAGACAGAAATTCAGACAACAGATGTTCGTGCTGAGTCTCCTCTGCAACTACACATTTCAACTTCTATGATGAAGACTTTTATGAAGCTAGCCAAGTCAAACACTGACAAAAATTTAGAGACTTGTGGTATTCTTGCAGGTTTGCTTAAAAACAGAAAATTTTATATTACCGCTCTAATAATCCCAAAGCAGGAGGCAACATCTAGTTCTTGCCAAGCTACAAACGAAGAGGAAATATTTGAAGTACAGGATAAGCAATCTCTTTTCCCCCTTGGATGGATCCATACACATCCCAGACAATCTTGTTTCATGTCATCAATTGATGTACACACCCATTACTCATATCAGATTATGCTTCCAGAAGCTGTTGCAATAGTTATGGCACCAACAGACAGTTCAAGAACCCATGGCATTTTTCGGTTGACAACCCCTGGTGGAATGTCGGTCATAAGACAATGCCCGCAACGTGGCTTTCATTCACATAATCAGCCTCCAGATGGTGGCCCCATTTACGATACATGCACAGATGTTTACATGAACCCAGATTTAAAATTTGATGTCATTGATCTTCGATGA 1521 0.4083 MCSSETINIAASTQKVDVDNRLALRFYYRIADNILKQADIFRAEKNIVDLYVMLLRFSSLVSETIPRHRDYRSSPQSKKEILRKKLLNSVIELEKLKPKVQQKINEFNSRREYHHHKHNGREKCHSTNLMVSPVKKQTLASYNQTKAIVPTTREIAYQGSRGQQFSSVRPVEENMRRLLLRPKEETLSRHSILGPNGLKGQWRPPASDKGVRYPTIIDLSPVEIPSLQQPLEDGSLSDKDNSISEQHRSDLESFVTQSDNSREKHADEAPSLISFEATEIPTQIEVIRQPSPPPVLAEVQDLIPAVSPHVIEEGCKTEIQTTDVRAESPLQLHISTSMMKTFMKLAKSNTDKNLETCGILAGLLKNRKFYITALIIPKQEATSSSCQATNEEEIFEVQDKQSLFPLGWIHTHPRQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRTHGIFRLTTPGGMSVIRQCPQRGFHSHNQPPDGGPIYDTCTDVYMNPDLKFDVIDLR* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3267 506 MobiDBLite consensus disorder prediction 228 268 - -
Pvu2g3267 506 ProSiteProfiles MPN domain profile. 332 462 IPR037518 -
Pvu2g3267 506 PANTHER AMSH-LIKE PROTEASE 4 506 - -
Pvu2g3267 506 MobiDBLite consensus disorder prediction 190 209 - -
Pvu2g3267 506 Pfam USP8 dimerisation domain 8 103 IPR015063 -
Pvu2g3267 506 SUPERFAMILY USP8 N-terminal domain-like 22 123 - -
Pvu2g3267 506 Gene3D - 3 128 - -
Pvu2g3267 506 SUPERFAMILY JAB1/MPN domain 331 462 - -
Pvu2g3267 506 Gene3D Cytidine Deaminase, domain 2 312 506 - -
Pvu2g3267 506 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 4 506 - -
Pvu2g3267 506 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 329 435 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pvu2g3267 506 CDD MPN_AMSH_like 331 506 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Pvu2g3267 506 SMART pad1_6 331 459 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3267 Pvu-Chr2 47775825 47783303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3267 K11866 - gmx:100800636 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3267 2 47775825 47783303 Pvu2g3267 2 47775825 47783303 ECH