Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3256 ATGCTGCTATGTCCCAAAGAAGATGCACTTGTTAAACTATTCTACAATGTCTCAAGCCCTTTCCACCTTCTCTTCCTCCTTCTCTTCTCCTCTGCCATTTTCCTTCTCACCTTCTTAACCTTCACAGGCAGATACCCTTTTATCCAAAGGGATCAAGAATATGAATATGTGTATACCGAGGATGAGGAAGAAGAAGAAAGTCAAGAAGGGTATTCTTGTGTTGATTCAACCGAGGGAGAAAACATCACTTGTGGGAAGGAAGTTCTAGTGTTTGTGCACAATGAGAGGCATCAAAGGACTCATTCTTATTCTGAAGAATTCATAAGCCCCAGAGAGAGCTTGGATGAAGAGTCAGAGGAAAAACATTATTCTGAAACGTTGTCTCTCCATAAGTCACCACTAGTTTCTGACTTCGACAATGCAGAAACGGTTGAAGATGACTTTACAGCAAGAGATTCTGATTCTGTTTCAAATTCTGCCCAAGTTGATAACAGGACCACCTCCCCCCTCAACCTCAATGCATACAAAAGAAACAAAAACCATGATGACGATCACGTTAGCGTTGAAATTATTAAAAACAAGAAGGTGCAAGAGCCAAACCTTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAGTTGCAGAGTAAGAAGTTGAGGGTTGAAGAGAAGGATGAAGAGTCCTCTAAATGGAAGAGCTCCATCAACTGCAGGGATTCCGAGACTGAGGATGCATTTTCTTCCTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTTCAAAAATATGATGAAGAAATGGCAATCTTAGACAGAATTAGTGCACAGAAACTTCATGAAACCGAGTCATTAAGGTCCATTCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAAACTATAAATAAAAAACCTGCTGATGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATATGTTGGACAAATTTGCTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACACCAGGACCATGATACTGGTTGTTCTGCCACAGTTGCTCAACAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCATGGTAGAAGACCTGAAATCTATGCTAGAATGAGACTTTTGGCACCCAAATTGCTCCTAGTGCCAGAATATCAAGAATTAGAGGAGGATCAGAAGGATGGTGGTTTTCACTGCAAAATATCGTCAGCTTCATTTCTAAAGATAATGGAGGATGGAATCAAAACATTCATGAATTTTCTAAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTTAGGAGAAACCAAAGAGGCACAGTTGATCCAACACTACTTCGACTAATGAAGAAGGTTAATCAAAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGCAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTCACAGACCTAAAAGTGGTGTCAAGGGTTTTAAGGATGAATGAACTGAGTGAAGAGCAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCACTCCACTTTTCTTCCCCTCACATTGA 1695 0.4059 MLLCPKEDALVKLFYNVSSPFHLLFLLLFSSAIFLLTFLTFTGRYPFIQRDQEYEYVYTEDEEEEESQEGYSCVDSTEGENITCGKEVLVFVHNERHQRTHSYSEEFISPRESLDEESEEKHYSETLSLHKSPLVSDFDNAETVEDDFTARDSDSVSNSAQVDNRTTSPLNLNAYKRNKNHDDDHVSVEIIKNKKVQEPNLARDERFFVFASTQLQSKKLRVEEKDEESSKWKSSINCRDSETEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTINKKPADVGHNPYRELEAAYVGQICLTWEALSWNYKNFRSKHASHQDHDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQELEEDQKDGGFHCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLRLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMNELSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3256 564 MobiDBLite consensus disorder prediction 153 172 - -
Pvu2g3256 564 Pfam Protein of unknown function (DUF1666) 323 562 IPR012870 -
Pvu2g3256 564 MobiDBLite consensus disorder prediction 148 172 - -
Pvu2g3256 564 MobiDBLite consensus disorder prediction 103 127 - -
Pvu2g3256 564 PANTHER DNA LIGASE (DUF1666)-RELATED 4 564 - -
Pvu2g3256 564 PANTHER DUF1666 FAMILY PROTEIN 4 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3256 Pvu-Chr2 47699630 47702772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3256 - - gmx:100776190 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3256 2 47699630 47702772 Pvu2g3256 2 47699630 47702772 ECH
Pvu2g3256 2 47699630 47702772 Pvu4g1660 4 43897291 43901040 PCT