Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3242 ATGGCCTTTTCTGCATCTTCGTCGTGGCTCGCACTCTCAGCCACCAACGCCAAACACAACCCCTTCTTCTCTGTCCCCAGCTGCATCAAATTCAATGCTCCCATCGCTTCGCAAATCCAATGGCATTCAGATTCATATACCCACAGAAACCTCCGTCCCCTTCCCCAAATCAAACGCCATTGGGTGGAAGCATCTGATCAATCTTTGGAGTCTCCGGAAACATTCAGCGTGGCCTCTTACAACATACTGGGGGATCGAAACGCTTCTCAACACTCCGATTTATACGTAAACGTTCCTTCTCGTTACATCAAATGGGATCGTCGCAAGAGGGTTATTTCCGATGAGCTTCTTGGATGGGACCCTGATATTATCTGCTTACAAGAGGTGGACAAGTATTTGGAAGTCTCAGACATTATGGTTAAAGCAGGATATGCTGGATCTTATCAGAGACGCACTGGAGATTCAGTTGACGGATGTGCCATCTTTTGGAAAACTGATAAGTTCCGGTTACTAGAAGGAGAGAATATTCAATTTAAAGACATTGGCCTTCGTGATAATGTTGCCCAACTGTCAGTTTTTGAGATGTGTGAATCTTACTCAAGGAGACTGATAGTTGGTAACATCCATGTACTTTACAACCCAAACAAGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTCATCAAGAGCACAGTATCTCTCGGAGAAATGGGGTAATATCCCTGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTTTTGTCATCATCTGAGCTTAATGTCAAGCTGTATGACAAAAAGGAATTATCTGGACAGAAACGGTGTCGTCCTGCTCAAGTTATATGGGAGAATAAAGAAACAGTTGGTCCAGTTGTCACCCAAGATAGCTTGTTAAAATGCTGGACAGATGAAGAGATAAAAATAGCAACCGGAGATTCTCAACGTCATTTGGCTGTGCATCCATTGAAGCTGAATAGTTCGTATGCCACAGTTAATGGTTCAACAAGTACACGGGGATTCAATGGTGAACCCTTGGCAACTTCCTATCACTCAAAGTTTCTTGGCACTGTAGATTATTTATGGTACTCGGACGGTATTGTACCTACTAGAGTTCTTGATACTGTTTCAATAAGTGATCTCCTAAGGGAAGGTGGCCTCCCATGCAAGAAGGTGGGAAGTGACCATTTGGCCTTGGTTTCTGAATTTACTTTCTCAGTTACCAACAATGAAGCAGCACCAGCAGCTATAGTAGATATTGAAGAGCCTAACAATCAGCAGTCATAA 1305 0.4291 MAFSASSSWLALSATNAKHNPFFSVPSCIKFNAPIASQIQWHSDSYTHRNLRPLPQIKRHWVEASDQSLESPETFSVASYNILGDRNASQHSDLYVNVPSRYIKWDRRKRVISDELLGWDPDIICLQEVDKYLEVSDIMVKAGYAGSYQRRTGDSVDGCAIFWKTDKFRLLEGENIQFKDIGLRDNVAQLSVFEMCESYSRRLIVGNIHVLYNPNKGEVKLGQIRFLSSRAQYLSEKWGNIPVVLAGDFNSTPQSGIYKFLSSSELNVKLYDKKELSGQKRCRPAQVIWENKETVGPVVTQDSLLKCWTDEEIKIATGDSQRHLAVHPLKLNSSYATVNGSTSTRGFNGEPLATSYHSKFLGTVDYLWYSDGIVPTRVLDTVSISDLLREGGLPCKKVGSDHLALVSEFTFSVTNNEAAPAAIVDIEEPNNQQS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3242 434 Pfam Endonuclease/Exonuclease/phosphatase family 78 402 IPR005135 GO:0003824
Pvu2g3242 434 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 38 413 - -
Pvu2g3242 434 Gene3D Endonuclease/exonuclease/phosphatase 47 424 IPR036691 -
Pvu2g3242 434 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 38 413 - -
Pvu2g3242 434 SUPERFAMILY DNase I-like 67 413 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3242 Pvu-Chr2 47575771 47583185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3242 54 263 EF-hand Containing Proteins AT5G54130 26.106 1.45e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3242 - - gmx:100779393 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3242 2 47575771 47583185 Pvu2g3242 2 47575771 47583185 ECH