Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3101 ATGGCTGGCTCGTTGGCAAGCCGTTCTCTGATTGTTCTTGCCATTGTAACCTTCGGATGTGTATTTGCAATTTCCATTGCAAAGGAGGAAGCTACAAAGTTGGGGACGGTCATTGGGATTGATCTTGGAACAACCTATTCTTGTGTTGGTGTTTATAGGAATGGCCATGTCGAAATCATAGCCAATGACCAAGGTAACCGTATCACTCCATCGTGGGTTGCCTTCACTGACAGTGAGAGACTCATTGGGGAGGCTGCCAAGAATCAGGCAGCTGTCAACCCCGAAAGGACCATCTTCGATGTTAAAAGACTTATTGGAAGAAAGTTTCAAGATAAGGAAGTTCAAAGAGACATGAAGCTCGTTCCTTACAAAATTGTCAACAAGGATGGAAAACCTTACATAGAGGTAAAAATTAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAGTCAGTGCCATGATTCTGACAAAGATGAAGGAAACCGCGGAAGCATTCCTTGGGAAGAAAATCAATGATGCTGTGGTCACTGTCCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGACGCTGGTGTCATTGCTGGTCTGAATGTTGCTAGAATTATCAACGAACCCACTGCTGCTGCCATTGCATATGGATTGGACAAGAAAGGTGGCGAGAAGAACATTCTAGTCTTTGATCTTGGGGGCGGGACATTTGATGTCAGTATCTTGACAATTGATAATGGTGTTTTTGAGGTTCTTGCAACAAATGGAGATACTCATCTTGGAGGTGAGGACTTTGATCATAGAATAATGGAGTACTTCATTAAATTGATCAAGAAGAAGCATTCAAAGGATATTAGCAAGGACAACAGAGCACTTGGCAAGCTGAGGAGAGAGGCCGAGCGTGCGAAGAGAGCTCTCAGCAGCCAGCACCAGGTCCGCGTGGAAATTGAATCACTTTTTGATGGTGTTGATTTCTCTGAGCCACTCACCCGAGCTCGGTTTGAGGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCAGTGAAGAAGGCCATGGAAGATGCTGGATTACAGAAGAGTCAGATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCGAAGGTTCAACAGCTTTTGAAGGACTACTTTGAAGGAAAGGAGCCAAACAAGGGTGTGAACCCTGATGAAGCAGTTGCCTATGGTGCTGCAGTGCAAGGAAGCATTTTGAGCGGAGAGGGCGGTGAAGAAACCAAAGATATCCTTCTCCTGGATGTGGCACCCCTCACCCTTGGAATTGAAACTGTTGGTGGAGTGATGACAAAGTTGATTCCCAGAAACACTGTTATCCCTACCAAGAAATCTCAGGTGTTTACCACCTACCAGGACCAGCAGACCACCGTCTCCATTCAGGTTTTCGAAGGTGAGAGGAGTCTGACAAAGGACTGCCGTCTGCTTGGGAAGTTTGATCTGTCAGGAATTCCTCCAGCTCCAAGGGGTACTCCTCAAATTGAAGTGACGTTTGAAGTTGACGCAAATGGCATTCTGAATGTGAAAGCGGAAGACAAAGGCACTGGGAAATCAGAAAAGATCACGATTACAAATGAGAAGGGACGTCTGAGCCAGGAGGAAATCGAGAGAATGGTTCGTGAGGCTGAGGAGTTTGCGGAGGAAGACAAAAAGGTGAAGGAGAGAATTGATGCTCGTAACAGTCTTGAAACCTACGTCTACAACATGAAAAACCAGATCAGTGACAAGGACAAACTGGCTGACAAGTTGGAGTCAGATGAAAAGGAGAAAATAGAGAGTGCAGTGAAGGAAGCATTGGAATGGCTGGATGATAACCAGAGTGTTGAGAAAGAAGAATATGAGGAGAAGCTCAAGGAGGTCGAAGCCGTTTGCAATCCAATCATCAGTGCTGTCTATCAGAGATCAGGAGGAGCCCCAGGTGGTAGTGATTCAGCCGAGGACGACGATGATTCTCACGACGAGCTCTAG 2001 0.4623 MAGSLASRSLIVLAIVTFGCVFAISIAKEEATKLGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYKIVNKDGKPYIEVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDHRIMEYFIKLIKKKHSKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQISDKDKLADKLESDEKEKIESAVKEALEWLDDNQSVEKEEYEEKLKEVEAVCNPIISAVYQRSGGAPGGSDSAEDDDDSHDEL* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3101 666 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
Pvu2g3101 666 Coils Coil 580 600 - -
Pvu2g3101 666 CDD HSPA5-like_NBD 35 409 IPR042050 -
Pvu2g3101 666 Pfam Hsp70 protein 37 644 IPR013126 GO:0005524|GO:0140662
Pvu2g3101 666 PANTHER LUMINAL-BINDING PROTEIN 22 652 - -
Pvu2g3101 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Pvu2g3101 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
Pvu2g3101 666 MobiDBLite consensus disorder prediction 643 666 - -
Pvu2g3101 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 570 IPR029047 -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 36 49 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 64 76 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 86 94 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 174 194 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 234 244 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 362 378 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 394 414 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 421 440 - -
Pvu2g3101 666 PRINTS 70kDa heat shock protein signature 502 518 - -
Pvu2g3101 666 Coils Coil 614 634 - -
Pvu2g3101 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 651 IPR029048 -
Pvu2g3101 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 574 IPR029047 -
Pvu2g3101 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Pvu2g3101 666 Coils Coil 546 566 - -
Pvu2g3101 666 Gene3D - 571 645 IPR029048 -
Pvu2g3101 666 Gene3D - 38 409 - -
Pvu2g3101 666 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Pvu2g3101 666 Gene3D Actin; Chain A, domain 4 260 343 - -
Pvu2g3101 666 Gene3D - 220 394 - -
Pvu2g3101 666 PANTHER HEAT SHOCK PROTEIN 70KDA 22 652 IPR013126 GO:0005524|GO:0140662
Pvu2g3101 666 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3101 Pvu-Chr2 46357082 46360857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3101 1 646 Miscellaneous Gene Families AT5G28540 91.950 0.0 1227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3101 K09490 - gmx:547839 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3101 2 46357082 46360857 Pvu2g3101 2 46357082 46360857 ECH