Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3099 ATGGCCATCCTCTCTCAATCCACTGCCAGTTTCTCCCCTTCCTTCGTCTCCACTCGCTCCGATTTCACTCGCCTCACTCGCTTCCCCTGCCGTGTCACCTTCCGCCGTCGTTTCACCGTTTCCTCATGCTTCAACTCCTCTAAGTCTCCCGGCGCCGGCGGCTTCCTCTCGCCGGACAACGGCGGTGATGTTTCCTACGAGCTGCACCACGACTTATCGGCGCAGCGCCGCCGCAGCGGCTCGCCGGTGTTCGTCACGATGCCGGTGAATTCCGTCAGCCGGGAGGGAGGCCGAGTCTTGAGGCCTAAGGCGATGATGTTCTCGCTCAAGGCGCTCGCCACGGCCGGCGTTGAAGGTGTCGTGGTCGAGATTTGGTGGGGCTTGGTTGAGAAGAACAAACCTAGGGTTTACGATTGGAGAGGGTACGAGGAACTTGTCGCTATGGCATGCAAGTGTGGCCTCAAGGTTCGAGCTGTTCTCTCCTTTCATCAGCATGGCGCAGGACCTGATGATCCCAATTGGATACCGCTTCCTCTATGGGTGCTTGATGAGATACAGAAAGATGTAGAGTTAGCATATTGTGACCGGTTCGGAAGAAGAAATATTGAATACATTTCCCTTGGATGTGATATTCTTCCTGTGCTGTGTGGACGATCTCCTATTCAAGTGTATGCTGATTTTATGAGAGATTTTAGGGACACTTTCAGGGCTTTGCTTGGTGTTATCATTACAGGTGTACAGATTGGCATGGGTCCTGGTGGTGAACTAAGGTATCCTTTGTCCTCTTTAGAAGAGCCAAATTTGGCATGGTCTGGTGAACTTGGAGAATTTCAATGCTATGACAAGTATATGCTTGCTTCTCTGAATGCCTCTGCAAGAAATATTGGAATGCGTGAATGGGGAAATGGTGGTCCATTTGGTACTGGAAGTTTGATGCACAATCCTGAGCATACTGATTTTTTCAAAAATGATGGTGGTTCTTGGGACAGACCATATGGTAAATTTTTCCTTGAATGGTACTCAGACATGTTGCTGCTGCATGGGGAAAGGATTTGTAGAGAAGCTGAAACTATATTTAGGGGTACAGAAGTCCATATATCAGCAAAATTGGCTGCCATTCACTGGCACTATGTCACACAATCCCATCCATCAGAGTTAACAGCTGGTTATTATAACACTTTTAACCGAGATGGATACTTACCCATTGCCCGTATGTTTAGTAAGTATGGATTCTCGATGTGCTGCTCTTGTTTTGAGATGCAAGATGCAATAATGCAGAAGATCAATCCAGATGGCAGCCCTGAAGGTTTTCTTAGACAGCTTTTGTTGGCTGCTAGACTCTGTGACCTATCACTTGAAGGTCAAAATTTTTCAACTAATTTGGATGATGGTGCATTCACCCAGGTGCTGAAGATGTCAAAGTTTTACTCGAATGGGATAGAGAAGCGACCTTTCTCGTTCAACTTTGTAAGAATGGACAAAAGATTGTTTGAATCCCGAAATTGGGATCGGTTTACTCGTTTTGTAAGACAAATGTCTAATGGAAATATCTTCCGAGCCAGATTATATTCTGTTGGTGACATACGGTTTAAGGCCGCACCAGTGATGGCGGAGGCGAGATTGTTGTACCATCTATATCAGTACTCTTGA 1650 0.4691 MAILSQSTASFSPSFVSTRSDFTRLTRFPCRVTFRRRFTVSSCFNSSKSPGAGGFLSPDNGGDVSYELHHDLSAQRRRSGSPVFVTMPVNSVSREGGRVLRPKAMMFSLKALATAGVEGVVVEIWWGLVEKNKPRVYDWRGYEELVAMACKCGLKVRAVLSFHQHGAGPDDPNWIPLPLWVLDEIQKDVELAYCDRFGRRNIEYISLGCDILPVLCGRSPIQVYADFMRDFRDTFRALLGVIITGVQIGMGPGGELRYPLSSLEEPNLAWSGELGEFQCYDKYMLASLNASARNIGMREWGNGGPFGTGSLMHNPEHTDFFKNDGGSWDRPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYVTQSHPSELTAGYYNTFNRDGYLPIARMFSKYGFSMCCSCFEMQDAIMQKINPDGSPEGFLRQLLLAARLCDLSLEGQNFSTNLDDGAFTQVLKMSKFYSNGIEKRPFSFNFVRMDKRLFESRNWDRFTRFVRQMSNGNIFRARLYSVGDIRFKAAPVMAEARLLYHLYQYS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3099 549 Pfam Glycosyl hydrolase family 14 103 508 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 Gene3D Glycosidases 72 533 - -
Pvu2g3099 549 SUPERFAMILY (Trans)glycosidases 79 537 IPR017853 -
Pvu2g3099 549 PANTHER - 3 527 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 116 130 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 137 155 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 159 180 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 273 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 328 347 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 364 380 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 381 392 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 422 IPR001554 GO:0000272|GO:0016161
Pvu2g3099 549 PANTHER BETA-AMYLASE 3 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3099 Pvu-Chr2 46340499 46343469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3099 2 542 Glycoside Hydrolase AT4G17090 44.144 7.28e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3099 K01177 - gmx:100805981 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3099 2 46340499 46343469 Pvu2g3099 2 46340499 46343469 ECH