Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3091 ATGGCAAGCATTGCTGGGACATGTCCTTTAGGAGCATTGCTCAGAAACAGTGTCCCAGAAAACAATAGGAAGATGTCTGTGGTACATTACGAGGGGCTTAGATTGCCACAACGAATGCAAATTCCTTCTTCACTTGCAACCAATCCAAGCCACTACATTTCAGCTTCTTCATCTCCAAGATGCAGGACAATCAAGGCCATGGCTTCCCCAACCGTTGCAGCACCAAATAGAGAAAAGGATCCAAAAAAGAGGGTAGTTATAACAGGAATGGGTCTTGTTTCAGTCTTTGGCAGTGACATTGATGCCTTTTACAACAAACTCCTTGAGGGAGAAAGTGGGATAAGCCTTATAGATAGGTTTGATGCGTCAAGTTTCTCTGTCCGTTTTGGAGGTCAGATACGTGATTTCTCTTCAGAAGGTTACATTGATGGCAAAAATGATCGGCGCCTTGATGATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCACTCAATGATGCCAACCTTGGACAACAAGTCCTTGACACTATGGACAAAACAAGAATAGGAGTTCTGGTGGGAACAGGAATGGGAGGTTTGACGGCTTTCTCTTCTGGTGTGCAAGCTCTTATCCAGAAGGGATATAAGAAAATTACTCCATTTTTCATTCCCTACTCCATCACCAACATGGGTTCTGCTTTGTTGGCTATAGACACAGGCCTAATGGGTCCAAATTATTCCATTTCCACTGCTTGTGCAACAGCAAATTACTGCTTTTATGCGGCTGCTAATCACATTAGAAGAGGTGAAGCAGATATAATGGTGGTTGGTGGGACTGAGGCTGCAATCATGCCTACTGGTGTTGGAGGTTTCATTGCTTGCAGGGCTTTGTCTCAGAGGAATGAAGACCCCAAGAAGGCTTCACGACCATGGGACAAAGATCGTGATGGTTTTGTAATGGGTGAAGGCTCTGGTGTGCTGATAATGGAGAGCTTGGAGAGTGCAACCAAGAGGGGAGCCACCATAGTAGCAGAATATTTGGGAGGTGCCATAACATGTGATGCTCATCACATGACTGATCCAAGATCGGATGGACTAGGAGTTTCATCTTGCATAACCAAGAGTTTAGAAGATGCTGGAGTTTCTCCCGAAGAGGTGAACTATGTGAATGCTCATGCCACATCAACATTGGCTGGTGACCTGGCTGAAGTTAATGCAATCAAAAAGGTTTTTAAGGACACATCAGAGTTGAAAATGAATGCAACTAAGTCAATGATTGGTCATGGTCTTGGGGCTGCTGGCGGTTTGGAAGCCATAGCAACTATCAAAGCCATAACAACTGGTTGGGTGCATCCAACCATTAACCAAGATAACTTGGAGCCTAGTGTTACAATTGACACTGTCCCTTACGTTAAGAAACAGCATGAAGTTAATGTTGGTATATCCAACTCATTTGGATTCGGTGGACACAATTCAGTAGTTGTCTTTGCCCCATTCAGACCATAA 1488 0.4442 MASIAGTCPLGALLRNSVPENNRKMSVVHYEGLRLPQRMQIPSSLATNPSHYISASSSPRCRTIKAMASPTVAAPNREKDPKKRVVITGMGLVSVFGSDIDAFYNKLLEGESGISLIDRFDASSFSVRFGGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKRALNDANLGQQVLDTMDKTRIGVLVGTGMGGLTAFSSGVQALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAIMPTGVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLIMESLESATKRGATIVAEYLGGAITCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATKSMIGHGLGAAGGLEAIATIKAITTGWVHPTINQDNLEPSVTIDTVPYVKKQHEVNVGISNSFGFGGHNSVVVFAPFRP* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3091 495 Pfam Beta-ketoacyl synthase, C-terminal domain 338 450 IPR014031 -
Pvu2g3091 495 SMART Beta-ketoacyl synthase 85 495 IPR020841 -
Pvu2g3091 495 CDD KAS_I_II 83 490 IPR000794 -
Pvu2g3091 495 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 83 490 IPR017568 GO:0006633|GO:0016747
Pvu2g3091 495 SUPERFAMILY Thiolase-like 297 491 IPR016039 GO:0016746
Pvu2g3091 495 SUPERFAMILY Thiolase-like 83 334 IPR016039 GO:0016746
Pvu2g3091 495 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 43 495 - -
Pvu2g3091 495 ProSitePatterns Beta-ketoacyl synthases active site. 237 253 IPR018201 GO:0004315|GO:0006633
Pvu2g3091 495 Pfam Beta-ketoacyl synthase, N-terminal domain 83 329 IPR014030 -
Pvu2g3091 495 Gene3D - 52 494 IPR016039 GO:0016746
Pvu2g3091 495 PANTHER POLYKETIDE SYNTHASE-RELATED 43 495 IPR000794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3091 Pvu-Chr2 46276020 46279427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3091 25 495 Acyl Lipid Metabolism Gene Families AT5G46290 71.341 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3091 K09458 - gmx:100798044 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3091 2 46276020 46279427 Pvu2g3091 2 46276020 46279427 ECH