Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3077 ATGTCAATTGCTGAGTTTGCGTTGAATACAGTTATCAAAGAGAAAGGGCAATGGGAAGGACAACCGGGACATTGTTCTGATGAGCCAATCTTGATTTATCTCACGGTGGATGGCGCTGTGACCCCAATGCGCGTGTTGGAGTCTGATTCCATTGCTTCGGTGAAACTGAGGATTCAGCAGTGCAAAGGCTTCGTGGTGAAAAAGCAGAAGTTGGTTTTTGGTGGCAGAGAGCTAGCTCGCAGTGGCACGCTTATCAAGGAGTATGGTGTCGCTGATGGCAATGTTCTTCACATGGTTCTTCGCCTCTCTGATCTTCTTTTCATTGTCGTGAGGACCGTTTCTGGGAAGAAGTATGAGTTCCACATCGATAGACACCGAAATGTGGGTTATCTGAAGCAACGCATTAGAAAAAAAGGGGATGGTTTCATTGATCTTGAGGATGATCAAGAGCTTTTCTGCAATGATGAGAAGCTCGATGACCAGAGCGTCTTCCATGACATATGCAAGAGTGACGACGATGTGATTCATTTGATAATTAAGAAATCGGCCAAGGTTAAGGCCACACCGATTCGCAAGGATTTGAAGCTCTCCGTGAAGGCATCAGGTGAGAGAATAAAACTTAATAGGGACAAACATGTTCAGATAGCAAATGTGCCACCAGATGTATGTTTCTGGTTGGAACCAATTATTCTGAATCCCAAGATCAATTTTCTTCCTTTCCTTTGGGATATGATACGCTCCACATTTGAAGGTTTGAAGAGAGGAAATGACCCTATTAGGTCCTCTGAGGGCACTGGAGGGACTTACTTCATGCAAGATTCAACAGGTCAGGAGTATGTTTCTGTTTTTAAGCCAATGGATGAGGAACCGATGGCTGTGAACAACCCAAGAGGTCTTCCAAGTTCATCCAATGGCGAAGGTTTGAAAATAGGGACAAAGGTTGGTGAAGGAGCCTTGAGGGAAGTTGCAGCATACTTGTTGGATCATCCAAAGAGTGGGCCACGTTTGTTGTCAGGTGAAGAAGTAGGGTTTTCTGGTGTTCCCCCTACTGTAATGGTGCAGTGCCTGCACAAAAAGTTTAACCACCCAAATGGATTTTCTTGCTCCTCAAAAGATGTTAAGATCGGGTCACTGCAGAAGTTCACTAGTAATGATGGTAACTGTGAGGACTTTGGACCCTGGGCTTTCCCAGTGGAGGAAGTGCATAAGATTACTGTGCTTGATATAAGACTGGCCAATGCAGACAGGCATGGTGGGAATATATTGATCAGAAAGGAGGAAGGTGGCCAGATAAAGCTCATTCCTATTGATCATGGCTACTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCGCAAGCGCGTAAGCCTTTCTCTCCTGAGACAGTTGAATATATAAATTCTCTGGATGCTGAAAAAGACTTGGAGCTTTTGAAATGTTATGGTTGGGATATTCCGCTTCAGTGTGCTAGAACACTTCGCATTTCCACAATGTTGCTGAAGAGAGGGGTTGAGAGAGGCCTTACTCCCTATGAAATTGGAAGCATTATGTGTCGGGAAAATTTGAACAAGGAATCTGTGATTGAAGAGATTATCATGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGAACCAGATTTTCTTGAAGCCATCTCGCGGAGCATGGATTCCCACCTTGATAAGCTTGCAAACTAG 1713 0.4448 MSIAEFALNTVIKEKGQWEGQPGHCSDEPILIYLTVDGAVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARSGTLIKEYGVADGNVLHMVLRLSDLLFIVVRTVSGKKYEFHIDRHRNVGYLKQRIRKKGDGFIDLEDDQELFCNDEKLDDQSVFHDICKSDDDVIHLIIKKSAKVKATPIRKDLKLSVKASGERIKLNRDKHVQIANVPPDVCFWLEPIILNPKINFLPFLWDMIRSTFEGLKRGNDPIRSSEGTGGTYFMQDSTGQEYVSVFKPMDEEPMAVNNPRGLPSSSNGEGLKIGTKVGEGALREVAAYLLDHPKSGPRLLSGEEVGFSGVPPTVMVQCLHKKFNHPNGFSCSSKDVKIGSLQKFTSNDGNCEDFGPWAFPVEEVHKITVLDIRLANADRHGGNILIRKEEGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQARKPFSPETVEYINSLDAEKDLELLKCYGWDIPLQCARTLRISTMLLKRGVERGLTPYEIGSIMCRENLNKESVIEEIIMEAQDSLLPGMEEPDFLEAISRSMDSHLDKLAN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3077 570 CDD Ubl_ubiquitin_like 108 178 - -
Pvu2g3077 570 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
Pvu2g3077 570 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
Pvu2g3077 570 SUPERFAMILY Ubiquitin-like 101 181 IPR029071 -
Pvu2g3077 570 Gene3D - 107 195 - -
Pvu2g3077 570 SUPERFAMILY Protein kinase-like (PK-like) 411 568 IPR011009 -
Pvu2g3077 570 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Pvu2g3077 570 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 255 552 IPR000403 -
Pvu2g3077 570 ProSiteProfiles Ubiquitin domain profile. 106 184 IPR000626 GO:0005515
Pvu2g3077 570 Pfam Phosphatidylinositol 3- and 4-kinase 264 518 IPR000403 -
Pvu2g3077 570 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 569 IPR044571 -
Pvu2g3077 570 Gene3D - 23 104 - -
Pvu2g3077 570 SMART ubq_7 106 180 IPR000626 GO:0005515
Pvu2g3077 570 SMART ubq_7 30 101 IPR000626 GO:0005515
Pvu2g3077 570 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 1 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3077 Pvu-Chr2 46156027 46159207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3077 1 569 Acyl Lipid Metabolism Gene Families AT5G24240 56.021 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3077 - - gmx:100809172 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1699 2 30662780 30665691 Pvu2g3077 2 46156027 46159207 PCT