Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3071 ATGACGCTAAACCTTTGCACTCCATGCTTCTCTCGCCTACTCCACCACCCTTTTTCTTCTCTCCCCAAACTCTCCGAAACCTGTGTCAACCACGCCGCCAACACCACCTCTCCTTTTCCCTCTCTATTTTTCACCACTCCCTCTCTTTCCAACCTTTCGCCATTCCTAAATTCCAAAGCCTCCGTCAGCGAGAGCCACAATGAAACCTCCGACGATACCGCTAACATACTCGACCAACAGCTCCTCCTCCAAGTCGCTGCCAACGCCAAAGACGCCGATGAGGCCTTGCAGATTATCGCCGACAACTCCTCCCGGAACGACGGCGTCGTTTCCACCTCCGACTGCTGCTCCGTTATCTCCGCTGCGCTTAACCGCAACAATCCTGAACTCGCTCTCTCCATCTTCTACGCCATGCGCGCCAGTTTTCATCCAGTTGACGAGAGTGGTTCTTTGGCTGCGAGATGGAAGTGGTCGCGGCCAAATGCAAATGTTTATGCTCTGTTGATTCAGGGTTTAGCGGCTGTGTTAAGGGTTTCTGACGCTCTTAGAGTGATTAAGTATATTTGTGAGGTTGGCGTTTCCCCTGGCGAGGAGGTACGTTTTGGGAAGATAGTGAAATGTCCTAGTTGTCAGATTGCTGTTGGTGTTGCACAGCCACAACAAGGTATTCAGATAGTATCTTGTTCCAAGTGTCGCTACCAATACGAACTTGTTTCAGGTGACATAGTCAGCATTGAATCAGAAGAAATCAGCATGGACATAACAGCGTGGGAAAGGGGGTTAAGATACATTAAACTGAGGAAGCAAAGCATTCCCTCTGCTGTTCATTCTATTGTGGTGCAGACCCCGTCTGGTATGGCTCGCACTCATAGATTTGCAACTGAAACAGTTGATCTGCCAGCACAAGAAGGAGAAAGGGTAACTATTGCTGTGGCAGCTCCATCAAACGTATATAGAAAGGTAGGCCCTTTTAAATTCAGTCCAAGGAATCCTGATTTCTATCCCGGTGAAGCTATGTGCATAACAAACCACAAAGATGGGCGGGAGTCACTACTGTTAAGAGCCCCAAGAAAAGAGGAAAATTCATCATTGCTGAAACCCTCCTTCCTTTTTCCACTTATCGCTTTGTTGGCCACTGGGGATGCCGCCTCTGGACTTGTTGACCCTGGCCTTCCCCAGTTACTATCAGTTGTTGCAGTTTCAACCCTTGTTGTTGGGTCTACGTTGAACACTGTTGTTCTTCCCCAGTTTAATCAGCTTCCACAGAAGTCAGTAGATGCAGTTGCGATCAAACAACGACTTCTATCTCAATATGATGTTCTTCTGTCTCGCATCAATGACCTCAAAGAAGCTGCTGAAAAAGAGGTTTGGATGCTAGCTCGAATGTGCCAACTTGAGAACAAAATTTCAGCTGTTGGAGAACCTGCTTATCGGACTCGGAGAAGTAAAGTCAAGAGGGTGCGAGAGAGCCTGCAAAACTCCCTTAGAGGACGGATTGAACTGATTGACAGCTATGCTAGGATTTCCTCAATGATTGAAATCGAAGTGGAGATGGAGACTGATGTTCTTGCTGCTGAAACTGCTAGTAACATAGACAGTATCTCAGAACAGATAGAGCAAATCATGGAGCTTGAAAATTTGGAGGAGGGATGGAAAATCCAAGCAGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCCCAGCCCATGCCTCTGGACGAAGTTTGA 1728 0.474 MTLNLCTPCFSRLLHHPFSSLPKLSETCVNHAANTTSPFPSLFFTTPSLSNLSPFLNSKASVSESHNETSDDTANILDQQLLLQVAANAKDADEALQIIADNSSRNDGVVSTSDCCSVISAALNRNNPELALSIFYAMRASFHPVDESGSLAARWKWSRPNANVYALLIQGLAAVLRVSDALRVIKYICEVGVSPGEEVRFGKIVKCPSCQIAVGVAQPQQGIQIVSCSKCRYQYELVSGDIVSIESEEISMDITAWERGLRYIKLRKQSIPSAVHSIVVQTPSGMARTHRFATETVDLPAQEGERVTIAVAAPSNVYRKVGPFKFSPRNPDFYPGEAMCITNHKDGRESLLLRAPRKEENSSLLKPSFLFPLIALLATGDAASGLVDPGLPQLLSVVAVSTLVVGSTLNTVVLPQFNQLPQKSVDAVAIKQRLLSQYDVLLSRINDLKEAAEKEVWMLARMCQLENKISAVGEPAYRTRRSKVKRVRESLQNSLRGRIELIDSYARISSMIEIEVEMETDVLAAETASNIDSISEQIEQIMELENLEEGWKIQAEANDEAERLLSSQPMPLDEV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3071 575 Coils Coil 431 451 - -
Pvu2g3071 575 Gene3D Tetratricopeptide repeat domain 77 200 IPR011990 GO:0005515
Pvu2g3071 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 574 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3071 - - gmx:100781803 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3071 2 46113925 46119481 Pvu2g3071 2 46113925 46119481 ECH