Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3065 ATGGCAGAAAAAAGGTTAATCGTAGAAGTGGAGAAAGCCACTGAGGCCACAGAAGAAAGGCCATCTATGGGTCCTGTCTACCGTAGCGTTTTCTGCAATGATCCAATTCCTCCTTCCGTAGAAGGTCTTGATACATGCTGGGATATTTTTAGGATGTCGGTCGAGAAATATCCTACAAACCCAATGCTTGGTGTTCGTGAAATTGTGGATGGGAAACCTGGCAATTTCAAGTGGCAAACTTACAAAGAGGTGTACGACATGGTGGTCAAGGTTGGAAATTCCATTCGTGCTTGTGGTTATGGGGAGGGAGTCAAATGTGGTATTTATGGTGCCAATAGCCCAAAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTTTTCTGTGTTCCTTTATATGATTCCTTGGGTGCTGGTGCTGTTGAATTTATTATAAGCCATGCAGAGGTCTCAATTGCGTTTGTTGAAGAAAAGAAGATACCTGAGCTGTTGAAGGCATTTCCAAATGCAGCAAACTATGTCAAGACAATTGTGAGTTTTGGAGATGTTACCCCTGAACAAAAGCAAGAAGTTGAAAAGTTTGGGTTGACCATGTATTCATGGGATGACTTTTTGAAAGTGGGTCATGATCAGACTTTTGAGCTTCCTGTGAAAAAGAAAAGTGATGTATGTACAATAATGTACACCAGCGGAACTACTGGTGACCCTAAGGGAGTATTGATATCCAATGAAAGCATTATCACACTTTTAGCTGGGATCCATAAAGTTCTGAAGAGTTGCAATGAGAAATTGAATGACAAAGATGTATACCTATCGTACCTTCCTCTTGCACATATCTTTGACAGGGTCATTGAGGAGGCAATGATAATGCACGGTGCCTCAATAGGCTTCTGGCGTGGAGATGTCAAATTATTACTAGAAGACATTGCAGAGCTAAAGCCAACCATTTTCGTTGCAGTTCCCCGTGTTCTTGATAGAGTATACAATGGTTTGACACAGAAGATTTCTACAGGGGGCTTTATAAAGCAGACAGTGTTCAATTTCGCCTACTCATACAAGTTGAGTAACATAAGTAAAGGGAAAAGTCATGAGGATGCATCTCCACTATTTGACAGAATTGTATTTAATAAGGTAAAGCAAGCTTTAGGGGGAAGAGTGCGTATTATTTTATCTGGAGCAGCACCTCTATCTAAACATGTGGAAGGTTTTCTGCGGGTGGTCACTTGTGCTCATATCCTACAAGGATATGGTCTAACTGAAACCTGTGCGGGAACCTTTGTGTCATTACCAAACGAAAAGGACATGCTTGGTACAGTGGGGCCTCCTGTACCATTTGTGGATGTGTGCTTAGAATCTATTCCTGAAATGGGATATGATGCACTTGCAAGCACACCAAGTGGAGAAATATGTGTGAGGGGAAAAACTGTGTTCACAGGGTACCACAAACGTGAAGACCTAACCAAAGAGGTTATGACCAATGGATGGTTCCACACAGGGGATATTGGAGAGTGGCAACCTAATGGAGCCATGAAAATTGTTGATAGGAAAAAAAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACATCTGGAGAATATTTATGTTCAAGCTTCTGTTGTTGAATCTATATGGATTTATGGAAATAGTTTTGAGTCATACCTAGTTGCTATTGTTAACCTTCACAAGCCAACGACTGAACAATGGGCAGAAGAAAATAATATAACTGCAGACTTTGATTCTCTCTGTGGAGATTCTAGAACAAAAACTTACGTAATCGGAGAGCTTGTCAAGATTGCAAAGGATAAGAAGTTAAAAGGGTTTGAGTTTATTAAGGCTGTTCATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCGACATTTAAGAAGAAAAGACCTGAATTGCTTAAATACTATCAGAATACCATTGACGAGATGTATAAAACACTGAACACACCCAACAAATCCAATGCCTAA 1998 0.4059 MAEKRLIVEVEKATEATEERPSMGPVYRSVFCNDPIPPSVEGLDTCWDIFRMSVEKYPTNPMLGVREIVDGKPGNFKWQTYKEVYDMVVKVGNSIRACGYGEGVKCGIYGANSPKWIMSMEACNAHGLFCVPLYDSLGAGAVEFIISHAEVSIAFVEEKKIPELLKAFPNAANYVKTIVSFGDVTPEQKQEVEKFGLTMYSWDDFLKVGHDQTFELPVKKKSDVCTIMYTSGTTGDPKGVLISNESIITLLAGIHKVLKSCNEKLNDKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDVKLLLEDIAELKPTIFVAVPRVLDRVYNGLTQKISTGGFIKQTVFNFAYSYKLSNISKGKSHEDASPLFDRIVFNKVKQALGGRVRIILSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPFVDVCLESIPEMGYDALASTPSGEICVRGKTVFTGYHKREDLTKEVMTNGWFHTGDIGEWQPNGAMKIVDRKKNIFKLSQGEYVAVEHLENIYVQASVVESIWIYGNSFESYLVAIVNLHKPTTEQWAEENNITADFDSLCGDSRTKTYVIGELVKIAKDKKLKGFEFIKAVHLDPVPFDMERGLMTPTFKKKRPELLKYYQNTIDEMYKTLNTPNKSNA* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3065 665 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 3 3 52 - -
Pvu2g3065 665 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 3 254 656 - -
Pvu2g3065 665 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 3 52 252 - -
Pvu2g3065 665 SUPERFAMILY Acetyl-CoA synthetase-like 42 659 - -
Pvu2g3065 665 Gene3D - 42 516 IPR042099 -
Pvu2g3065 665 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Pvu2g3065 665 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Pvu2g3065 665 Pfam AMP-binding enzyme 54 524 IPR000873 -
Pvu2g3065 665 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 254 656 - -
Pvu2g3065 665 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 52 - -
Pvu2g3065 665 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 52 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3065 Pvu-Chr2 46077706 46083809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3065 3 659 Acyl Lipid Metabolism Gene Families AT4G23850 70.167 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3065 K01897 - gmx:100811306 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1688 2 30564893 30574380 Pvu2g3065 2 46077706 46083809 PCT