Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3049 ATGGTGAAACATCGCCTTAGAGAGTCTATCAAATCTTTGTTTGGAAGTCATATTGACTCTAATAAAGAAGAGCAGCTCCAGGTAGCTAAAGCAGATATTGAAGACAAAGTGAAAGAAATATTGAAACTTATTAAAAATGACAACCTTGAAGAGGATGGTATTTCTAAGAGGGAACCACTTATTGAACTGGTTGAAGATTTCCACAATCAATACCAATTACTGTATGCACAATATGATAATCTAACAGGTGAGTTAAGGAAAAGGATCAAGGGCAAGCGAGAAAATGAGAGTTCTTCATCCAGCTCAGACTCAGATTCAGATTATTCTTCAAAGAACAAAGGCAAAAAAAACGGACAATTGGAAAATGAATTTCAAAAGACAATCGATGGCTTAAAGCAAGAACTTGAAGTGGTGCATGCAGAAGTGGCTGAATCAAATCGGAAGTTGACAATTTCACATGAAGAGAAGGAGGATCTTAATTCCAAATATCTTGCAGCACTGAACAAGATACAAGAAGCAGATACAGTTAACATGGATTTGAAAAGTGACGCTGAAGCATCAGGCATTCAAAGATCTAAACTTTTGGTTGAGAATGCTGAACTAAATAAACAAGTGGATATTGCTGCTAAAGTAGAAGCTGAACTGAGTCAAAGATTGGAAGAGCTGAAGATAGAAAAAGATAGTTTGACCATGGAGAAGGAGACAGCTCTCCAACAGATTGAGGAGGAAAAGAAGACTACTGATGGCCTCAAAACCCTTGTTGATCAACTGAAGGATGAGAAATTAGCTCTTAGCAAAGAGTTAGAGGCAGTTACAGGTGAACTTTCCGTTCTGAAACAGCAGTTGGAACACGCTGAACAGAAAATGACAGGTATAAGTCACAATCTGAAAGTTGCTGAGGAAGAAAACGAATCTTTAAAAATGCAACTTTCACAGGCTTCAAATGAGGTTCAGCAAGCTCATAGTAGAATACAAGAATTTGTAGCTGAATCAAGTCAGTTAAAGGAAAAACTTGATGAGAGTGGAAGGGAAATTTCTGCCTTTACTCAGATGCATGAAGGGTTTCAGAAAGAATCCTCAAATCGTATCACGGAATTTGAGGCACAGGTCACCAACCTGGAGTTGGAGTTAGAATCACTGAAAAACCAGAAAAGAGATATGGAAGAGCAAATGAAGAGCAGCACCACTGAAGCAAGGGAACTAGGAGAGCACAATTCAGGCCTACAAAACCAAATATCGCAACTTGAATTGAAGTCCAGAGAAAGAGAAGAGGAGCTGTCTGCTATGGTGAAGAAACTTGAAGATAATGAGAATGAGTCATCTTTGAAAATGTCAGATTTAACATTTCAGATAAACAAGCTGCTAACTGATATTGAGACACTACATACTCAAAAAGGTGAACTGGAAGAGCAGATAATTTTTAAAAGTAACGAAGCTTCCACTCAACTGGAAAGCATTACAAATGAGGTGAATGCATTGCAGCAAGAAGTGACGTCCCTCCAACACCAGAAGTCTGACTTGGAAGCTCAGTTAGTAGAAAAAGTCCACGAGAACTCCAAGAATGTGATTGAAATGCAAAATCTGAAAGAGGAAATTGACAGAAAAATCCGGGAACAAGAGAGACTTCTGGAAGACACGGAAAATTTAGCCATGCAGCTAAGGACATTGGAATCAGAGATGAGCACCGTTCAGAACAAAAACAGTGAAGCTGAAGAGGAAATAAGATATAAAAACCATGAGATCAGTCAAATGAGAGAGGGAATGTTGGAGCTACATGACAGAATAGCAGAAATAGAGAAGTCATCAACAGAGAGAGAATCAAATTTCTTGATTCTCCGGGATAAGTTTATTAGCGCAGAGCAAGAAGTTTCAGCTGAAATTAAGAATCTTGAACATGATTTGGCATCACTGCAGAAAGAGAAACACGAATTAGAACAGCAGTGTGAAAAGCTGAAGTTGGAGGTGGATTCTATACAGAACCAAAAGAGCGAAGTTGAAGAACAAATGAGAACTAAAGACCATGAGAACTGTGGACTAAGAGAAGAAATTTTGGGATTGCAGGGAACGATAGCTGTGTTGGAGAAGACAGTAGCCGAGAAAGAGGCAGAGCTATCCAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGTCAAAGAACTGGCTTCATAGTCCAGATTGATAATCTGAAACATGATTTGGCGTCCTTGCAGAATGAGAAAGAGGAAGTAGAACAGCAATGTGAAAAGCTGAAGATGGAGCTGGATTCCACTCAAAACCAGAAAGTTCAAGTTGAAGAGCAGTTGAGAGCTAAAGACCAAGAGAACACGGAACTGAGAGAGGAAAAATTTGGATTGCAGGGAACAATTACTGCACTGCAGAAAACATTAGACAAGGTAGAGGCAGAGCTATCTAGTTTACAGGAAAAGCTTCATGAAAAAGAGAGCGAGGCTTCAGGCCAAATAACTGCCTTCACAGTCCAGATTGAAAATCTGAAACATGATCTGGCGTCCTTGCAGAATGAGAAAGAGGAAGTAGATCAGCAGTGTGAAAAGCTGAAGATGGAGCTGGATTCCTCTCAAAACCAGAAGGGTGAAGTTGAAGAGCAGATAAGAGCTAAAGACCATGTGAACACCCAACTGAAAGAGGAAATTTCGGGATTGCAGGGAACAATTACTGCACTGGAGAACAGATTAGCTGAGAAAGAGTCAGAGTTATCCACTTTAAAGGAAAATCTTCACCAAAAGGATAGTGAGGCTTCTGGCCAAATAGCTGCCTTCACAATCCAAATTGATAATCTGAAACATGATTTGGTGTCCCTAGAGAATGAGAACCAAGAATTAGAGCAGCAGTGTGAAAAGCTGAAGATGGAGGTGGATTCCACACAAAACCAGAAGGGTGAAGTTGAAGAGCAAATCAGAGCTAAAGACCATGAGAACACTGAACTGAGAGAGGAAATTTTAGGATTGCAGGCAACGATTACTGCACTGGAGAAAAAATTAGCTGAGAAAGAGTCAGAGTTATCCACTTTACAGGAAAAACTTGACGAAAAAGAGAGTGAGGCTTCCGCCCAAGTAATTGCCTTCACGGCCCAAATTGATAATCTGCAGAAAGACTTACTTTCCTTACAAAGAACAAAAGAAGAATTGGAGCTGGACTACGAAAAAATTAGTGAAGAACATGCAAAAAGCCTTGTAATGGCAGAGAATGAAAAGAATGATATATCAAGCAGGACTATGGATCTTACGAGAACACTAGAAGAGCGAGAAAATTCACACCAGAGCTTAAATGAAGAATATAAAAAAATTGATGGTTTGTTTCAGGAATGCATGGTCAAGCTTGAAGTTGCAGAGAAGAAGATTGAAGAAATGGCAGGAGAGTTTCGTGAAGGCATTGCGTTGAAAGATAAGAAGGTAGCTGCTTTGGAACATGCAGTAGAAGACCTAAAAAGTGACCTAGAAGAGAAAGGAGATGAAATCAGTACTTCGCTTGAGAATGTTCGGATGCTTGAGGTCAAGCTTCGTCTGTCAAACCAGAAGCTGCGGGTCACAGAGCAATTGCTGAGTGAGAAAGAAGAAAGCTTTAGGAAGACAGAGGAAAAATTTCAGCAAGATCAGAAAGCACTTGAAGACAGAATTGCTATTTTATCAGCAACAATAACTGCTAACAATGAAGCTTTGGATGGAATTGTCTCTAATGTCAGAGAGTGTGTGGACAGTGTCAGGACTGGCATTGAATTTGTAAGCTGTCGAGTTTCTGATGACTGCAAAAATTACGAGCAGTGTGTCTCTAACATCTCAGGCGATATTGAGGTTGTAAAGAGGCAAGTTAGGGATATGAACAAGGAAAAGGAGAAGCTAAAGAGAGAGAAAAGACAGTTGCTGAAGCAACTGCAAGTTAAAAATGAAGAGGAAGTGGCTTTGAAGAAGACAGTTGAGAAGCTAGAGGCAAAGACAAGGAAGGAGGAATCAGAGAAGATGAATCTGACAACAACTGTAGTACAACTAAAGAAGACAGTTAGAGAGTTGGAGAAAATGATGAAAGAGAAAGAGGATGGTATGTTGGACTTGGGAGAGGAGAAGAGGGAGGTCATAAGGCAGCTGTGTTTGTGGATTGATTATCATCGCAGTCGCTATGACTATCTCAAGGACGTTCTATCAAATACTCGCAGGGGCCAGAGACCAGCATAA 4197 0.4008 MVKHRLRESIKSLFGSHIDSNKEEQLQVAKADIEDKVKEILKLIKNDNLEEDGISKREPLIELVEDFHNQYQLLYAQYDNLTGELRKRIKGKRENESSSSSSDSDSDYSSKNKGKKNGQLENEFQKTIDGLKQELEVVHAEVAESNRKLTISHEEKEDLNSKYLAALNKIQEADTVNMDLKSDAEASGIQRSKLLVENAELNKQVDIAAKVEAELSQRLEELKIEKDSLTMEKETALQQIEEEKKTTDGLKTLVDQLKDEKLALSKELEAVTGELSVLKQQLEHAEQKMTGISHNLKVAEEENESLKMQLSQASNEVQQAHSRIQEFVAESSQLKEKLDESGREISAFTQMHEGFQKESSNRITEFEAQVTNLELELESLKNQKRDMEEQMKSSTTEARELGEHNSGLQNQISQLELKSREREEELSAMVKKLEDNENESSLKMSDLTFQINKLLTDIETLHTQKGELEEQIIFKSNEASTQLESITNEVNALQQEVTSLQHQKSDLEAQLVEKVHENSKNVIEMQNLKEEIDRKIREQERLLEDTENLAMQLRTLESEMSTVQNKNSEAEEEIRYKNHEISQMREGMLELHDRIAEIEKSSTERESNFLILRDKFISAEQEVSAEIKNLEHDLASLQKEKHELEQQCEKLKLEVDSIQNQKSEVEEQMRTKDHENCGLREEILGLQGTIAVLEKTVAEKEAELSSLQEKLHEKESEASGQRTGFIVQIDNLKHDLASLQNEKEEVEQQCEKLKMELDSTQNQKVQVEEQLRAKDQENTELREEKFGLQGTITALQKTLDKVEAELSSLQEKLHEKESEASGQITAFTVQIENLKHDLASLQNEKEEVDQQCEKLKMELDSSQNQKGEVEEQIRAKDHVNTQLKEEISGLQGTITALENRLAEKESELSTLKENLHQKDSEASGQIAAFTIQIDNLKHDLVSLENENQELEQQCEKLKMEVDSTQNQKGEVEEQIRAKDHENTELREEILGLQATITALEKKLAEKESELSTLQEKLDEKESEASAQVIAFTAQIDNLQKDLLSLQRTKEELELDYEKISEEHAKSLVMAENEKNDISSRTMDLTRTLEERENSHQSLNEEYKKIDGLFQECMVKLEVAEKKIEEMAGEFREGIALKDKKVAALEHAVEDLKSDLEEKGDEISTSLENVRMLEVKLRLSNQKLRVTEQLLSEKEESFRKTEEKFQQDQKALEDRIAILSATITANNEALDGIVSNVRECVDSVRTGIEFVSCRVSDDCKNYEQCVSNISGDIEVVKRQVRDMNKEKEKLKREKRQLLKQLQVKNEEEVALKKTVEKLEAKTRKEESEKMNLTTTVVQLKKTVRELEKMMKEKEDGMLDLGEEKREVIRQLCLWIDYHRSRYDYLKDVLSNTRRGQRPA* 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3049 1398 MobiDBLite consensus disorder prediction 381 399 - -
Pvu2g3049 1398 Coils Coil 792 819 - -
Pvu2g3049 1398 Coils Coil 880 921 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 750 863 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 956 1396 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 639 756 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 844 959 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 1 651 - -
Pvu2g3049 1398 MobiDBLite consensus disorder prediction 90 120 - -
Pvu2g3049 1398 Coils Coil 729 784 - -
Pvu2g3049 1398 Pfam KIP1-like protein 14 79 IPR011684 GO:0003779
Pvu2g3049 1398 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 85 IPR011684 GO:0003779
Pvu2g3049 1398 Coils Coil 824 872 - -
Pvu2g3049 1398 SUPERFAMILY Tropomyosin 730 950 - -
Pvu2g3049 1398 Coils Coil 926 1023 - -
Pvu2g3049 1398 Coils Coil 620 675 - -
Pvu2g3049 1398 Coils Coil 1272 1362 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 1 651 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 844 959 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 750 863 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 639 756 - -
Pvu2g3049 1398 PANTHER COP1-INTERACTIVE PROTEIN 1 956 1396 - -
Pvu2g3049 1398 Coils Coil 1183 1203 - -
Pvu2g3049 1398 Coils Coil 451 471 - -
Pvu2g3049 1398 Coils Coil 522 573 - -
Pvu2g3049 1398 MobiDBLite consensus disorder prediction 400 415 - -
Pvu2g3049 1398 MobiDBLite consensus disorder prediction 381 416 - -
Pvu2g3049 1398 Coils Coil 1134 1161 - -
Pvu2g3049 1398 Coils Coil 356 439 - -
Pvu2g3049 1398 Coils Coil 476 510 - -
Pvu2g3049 1398 Coils Coil 690 717 - -
Pvu2g3049 1398 Coils Coil 128 148 - -
Pvu2g3049 1398 Coils Coil 205 344 - -
Pvu2g3049 1398 Gene3D - 788 892 - -
Pvu2g3049 1398 Gene3D - 894 1075 - -
Pvu2g3049 1398 Gene3D - 647 786 - -
Pvu2g3049 1398 Gene3D - 482 646 - -
Pvu2g3049 1398 Coils Coil 1035 1062 - -
Pvu2g3049 1398 Gene3D - 262 358 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3049 - K20478 gmx:100778046 2058.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3049 2 45968100 45972701 Pvu2g3049 2 45968100 45972701 ECH
Pvu2g1678 2 30484983 30487537 Pvu2g3049 2 45968100 45972701 PCT