Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3038 ATGGAAAGATTGTGTGTGAAAAATACTCTTGATGCACGACTTGATGTAGTGCTTCGTAAAAAGCTCCCTGAGAACCGTACTCTCTCCAAAGTCGACGAGACCATTGATCGGGCCCGCAATCCTAGTGAATTCATCCTGTCCCTTCAGCGTCCCAGATCTGTCATCATCCTCGTCAAGGCCGGCACCCCCGTTGACCAAACTATCGCCGCGCTCTCCAACCTCGAGCCCGGCGACTGCATCATTGACGGCGGTAATGAATGGTACGAGAATACCGAACGTCGCATCAGTCAAGCCGCCGAAAAAGGTCTCCTCTACCTTGGTATGGGCATCTCTGGCGGGGAAAACGGTGCGCGATACGGCCCCTCCCTCATGCCCGGCGGTTCCAAAACCGCCTACGACAATGTACACGACATCCTTCACAAAATCGCCGCGCAGGTCGATGATGGTCCACAATGGATTCGAATACAGAGATATGCAACTCATCTTGGATGCTTACAACGTGTTGAAGCATACAGGTATGAAGGAGACGGGAAAATGGACGGGAAAATGGACGGTGCAGCAGGCGGCGGATCTGTCAATAGCAGCCCCGACGATTGCGGGGTCGTTGGATTGCAGGTACTTGAGCGGGTTAAAGGAGGAGAGGGAGAATGCTGCGACGGTGTCGAAGAAGGAGAATTAGCTAGGATTTGGAAGGGAGGATGCATCACAAGTCCAGTGTTCTTGGACAGGATCAAGAAAGCTTATCAGATAAACCCTAATTTGACTAGTTTGATAGACGATCCGGAGTTTACAAGGGAAATGAAACAGAGGCAGGCTGCGTGGAGACGGGTTTTGGGTTTGGCGGTTTCAGCTGGGATTAGTACTCCGGGAATGGCTGCTAGTCTTGCTTACTTTGATACTGTTAGGTCCTACAGTGCAGCAGTTTGA 927 0.5146 MERLCVKNTLDARLDVVLRKKLPENRTLSKVDETIDRARNPSEFILSLQRPRSVIILVKAGTPVDQTIAALSNLEPGDCIIDGGNEWYENTERRISQAAEKGLLYLGMGISGGENGARYGPSLMPGGSKTAYDNVHDILHKIAAQVDDGPQWIRIQRYATHLGCLQRVEAYRYEGDGKMDGKMDGAAGGGSVNSSPDDCGVVGLQVLERVKGGEGECCDGVEEGELARIWKGGCITSPVFLDRIKKAYQINPNLTSLIDDPEFTREMKQRQAAWRRVLGLAVSAGISTPGMAASLAYFDTVRSYSAAV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3038 308 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 222 303 IPR008927 -
Pvu2g3038 308 PRINTS 6-phosphogluconate dehydrogenase signature 50 79 IPR006183 GO:0004616
Pvu2g3038 308 PRINTS 6-phosphogluconate dehydrogenase signature 102 127 IPR006183 GO:0004616
Pvu2g3038 308 Gene3D - 203 304 IPR013328 GO:0016491
Pvu2g3038 308 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 222 304 IPR006114 GO:0004616|GO:0006098
Pvu2g3038 308 SMART 6PGD_2 122 307 IPR006114 GO:0004616|GO:0006098
Pvu2g3038 308 Gene3D - 4 163 - -
Pvu2g3038 308 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 25 151 IPR006183 GO:0004616
Pvu2g3038 308 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 221 303 IPR006183 GO:0004616
Pvu2g3038 308 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 24 146 IPR006115 GO:0050661
Pvu2g3038 308 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 25 151 - -
Pvu2g3038 308 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 221 303 - -
Pvu2g3038 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 150 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3038 Pvu-Chr2 45885936 45890241 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3038 K00033 - gmx:100803740 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3038 2 45885936 45890241 Pvu2g3038 2 45885936 45890241 ECH