Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3008 ATGAGTCGAGGTGAAAGAAGTGGTGGTGGACAAAGCTCCTTAAATTACCTATTTGGGTCAGAAGAGAAGCCAAAGCCTTCTCCTCCAAAGACAGTTTCATGTTCATTGCCACCTTATGGCATTGAAATGGATAACAATAACCCTCCCATTGCTCATCCTCCTCCTTCTCAGGGTCAACACCTGGGAAATCTTCTAACAAATCGTCCATCCACAAAAGTCAAATCGGTTCCCGGTGGACACTTGTCGCTAGGATACTTGTTCGGAGACAAGTGA 273 0.4542 MSRGERSGGGQSSLNYLFGSEEKPKPSPPKTVSCSLPPYGIEMDNNNPPIAHPPPSQGQHLGNLLTNRPSTKVKSVPGGHLSLGYLFGDK* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3008 90 PANTHER SPR1 1 90 IPR039613 GO:0043622
Pvu2g3008 90 MobiDBLite consensus disorder prediction 1 76 - -
Pvu2g3008 90 MobiDBLite consensus disorder prediction 1 18 - -
Pvu2g3008 90 MobiDBLite consensus disorder prediction 59 73 - -
Pvu2g3008 90 PANTHER PROTEIN SPIRAL1-LIKE 5 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3008 Pvu-Chr2 45566192 45566998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3008 K18635 - gmx:100801246 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1641 2 30137371 30138525 Pvu2g3008 2 45566192 45566998 PCT