Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2996 ATTAATTTTCAGAAGAAGTATTCCCCATTATATTCCTCACTACCAAGGGTCAAGCAAGTAAGCAAGAGGCTAATTTGTGCTGTTGCCACAGAGGATTTACCAAAGCAAGTTGAAGAATCTGAAATGGAGACACCAAAGGAAATATTCTTAAAGGATTATAAGAAGCCTGATTACTACTTTGACACTGTGGATCTAAAATTTTCCTTGGGAGAGGAGAAGACAATAGTTAATTCTAAAATTGCTGTGTATCCTCGCATTGAAGGTTCTTCTTCCCCTCTAGTTTTAGATGGACAAGATGTATCTTTAGTTTCAATTCAGCTTAATGGAAAGGCTTTGAAGGAGGAAGATTATCATTTGAATGCACGTCATCTCACAATCCGATCACCTCCTAGTGGTAATTATGATCTCGAAATTGTCACAGAGATTTGTCCACAGAAAAATACATCATTAGAGGGACTTTACAAATCGTCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGTTTCCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATTTACAGTTCGCATTGAGGCTGATAAATCACTGTATCCAGTGTTATTGTCTAATGGAAACCTGGCTGAGCAAGGTGACCTGCAGGACGGGAGGCATTATGCTGTATGGGAGGACCCCTTCAAGAAACCTTCTTACCTGTTTGCCTTGGTTGCCGGACAATTACAGAGCAGAGATGACACATTCATTACCCGTTCAGGGCGGAATGTGTCCCTTAGGATATGGACACCTGCAGAAGATGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGACCTGGATCTCTTCAATATTGTTGCTGTCCCAGATTTTAACATGGGAGCCATGGAGAACAAGAGCTTGAATATTTTCAATTCAAAGCTTGTATTGGCCTCTCCAGAAACTGCTTCTGATGCAGATTATGCTGCAATATTGGGGGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACGTGTCGTGACTGGTTCCAGCTTAGCCTGAAAGAAGGTCTCACCGTTTTTCGTGATCAGGAATTTTCATCTGATATGGGAAGTCGTACTGTAAAACGGATTGCTGATGTTTGTAAACTTAGAAATTACCAGTTTCCACAGGATGCTGGTCCCATGGCCCATCCAGTGCGACCACATTCTTATATCAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTTTTGGGAAGCCAAGGGTTCCGAAAAGGCATGGATCTTTATTTCAAGAGACATGATGGTCAAGCTGTAACATGTGAAGATTTTTTTGCTGCCATGAGGGATGCAAATGATGCTGATTTTGCAAATTTTTTGCTGTGGTATTCTCAAGCTGGGACCCCTGTTGTCAAAGTAAAGACTTCTTATAATTCAGAAGCACATACTTTTTCTTTGAATATTAGTCAAGAAATACCATCAACTCCAGGACAATCAGTTAAGGAACCCACTTTCATTCCTGTTGCAGTGGGTTTGCTTGATTCCACCGGGAAGGACATTCCTCTTTCAAGTGTTTATCATAACGGGACTCTGCGATCTGTTTCAAACAGTGATCAACCAGTCTGCACTACAGTCCTTATAGTGACCAAGAATGAGGAAGAGTTTGTATTCACTGATATATTTGAGAGGCCTGTTCCTTCTCTGTTAAGGGGATACAGTGCTCCTGTTCGTCTGGAATCTGATCTCACTGAGAGTGACCTGTTTTTCCTGCTAGCTAATGATTCTGATGAATTCAACCGTTGGGAGTCTGGACAAGTTTTGGCACGGAAATTGATGCTTAGCTTGGTGGATGATTTTCAACATGGCAAACCATTGGTTTTGAATCCCAATTTTGTTGATGGGTTCAAACGTATTCTATGTGACTCAAGTCTGGACAAAGAATTTGTGGCAAAGGCAATAACTCTGCCTGGGGAAGGAGAAATAATGGACATGATGGGGGTTGCAGATCCAGATGCTGTTCATGCTGTTCGGACTTTCATCAGGAATCAGCTTGCAAGTGAACTGAGATCAGAGTTCCTCAGCACAGTAGAAAATAATAGGAGCACAGCCGAATATGTCTTCAATCACTCAAACTTGGCCAGGCGTGCTCTGAAGAATATTGCTCTTG 2194 0.4157 INFQKKYSPLYSSLPRVKQVSKRLICAVATEDLPKQVEESEMETPKEIFLKDYKKPDYYFDTVDLKFSLGEEKTIVNSKIAVYPRIEGSSSPLVLDGQDVSLVSIQLNGKALKEEDYHLNARHLTIRSPPSGNYDLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKFTVRIEADKSLYPVLLSNGNLAEQGDLQDGRHYAVWEDPFKKPSYLFALVAGQLQSRDDTFITRSGRNVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVCKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTFLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPVVKVKTSYNSEAHTFSLNISQEIPSTPGQSVKEPTFIPVAVGLLDSTGKDIPLSSVYHNGTLRSVSNSDQPVCTTVLIVTKNEEEFVFTDIFERPVPSLLRGYSAPVRLESDLTESDLFFLLANDSDEFNRWESGQVLARKLMLSLVDDFQHGKPLVLNPNFVDGFKRILCDSSLDKEFVAKAITLPGEGEIMDMMGVADPDAVHAVRTFIRNQLASELRSEFLSTVENNRSTAEYVFNHSNLARRALKNIAL 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2996 731 CDD M1_APN 52 473 - -
Pvu2g2996 731 Pfam Domain of unknown function (DUF3458_C) ARM repeats 594 731 IPR024601 -
Pvu2g2996 731 TIGRFAM pepN_proteo: aminopeptidase N 52 731 IPR012779 GO:0008270
Pvu2g2996 731 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 248 482 - -
Pvu2g2996 731 Gene3D tricorn interacting facor f3 domain 55 238 IPR042097 -
Pvu2g2996 731 Gene3D Neutral Protease Domain 2 324 475 IPR027268 -
Pvu2g2996 731 Gene3D - 239 323 - -
Pvu2g2996 731 PRINTS Membrane alanyl dipeptidase (M1) family signature 170 185 IPR001930 GO:0006508
Pvu2g2996 731 PRINTS Membrane alanyl dipeptidase (M1) family signature 220 235 IPR001930 GO:0006508
Pvu2g2996 731 PRINTS Membrane alanyl dipeptidase (M1) family signature 302 312 IPR001930 GO:0006508
Pvu2g2996 731 PRINTS Membrane alanyl dipeptidase (M1) family signature 338 353 IPR001930 GO:0006508
Pvu2g2996 731 PRINTS Membrane alanyl dipeptidase (M1) family signature 357 369 IPR001930 GO:0006508
Pvu2g2996 731 Pfam Peptidase family M1 domain 272 468 IPR014782 GO:0008237|GO:0008270
Pvu2g2996 731 Pfam Peptidase M1 N-terminal domain 56 230 IPR045357 -
Pvu2g2996 731 PANTHER - 413 730 IPR012779 GO:0008270
Pvu2g2996 731 PANTHER - 7 415 IPR012779 GO:0008270
Pvu2g2996 731 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 46 236 IPR042097 -
Pvu2g2996 731 Gene3D - 591 731 IPR037144 -
Pvu2g2996 731 PANTHER BNAC06G01820D PROTEIN 7 415 - -
Pvu2g2996 731 PANTHER BNAC06G01820D PROTEIN 413 730 - -
Pvu2g2996 731 Pfam Domain of unknown function (DUF3458) Ig-like fold 476 589 IPR035414 -
Pvu2g2996 731 Gene3D - 476 589 IPR038438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2996 Pvu-Chr2 45402527 45409377 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2996 K01256 - gmx:100775476 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2996 2 45402527 45409377 Pvu2g2996 2 45402527 45409377 ECH