Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2993 ATGCCACCTTTTGCAGGTTCTGAACCAGCTGGCTTCCCCAAGCCCGATTCCAACATAGTTTCCATCGACGTCGGAGGCCAAGTCTTCCAAACCACCAAACAGACACTAACCTCAGCGGGTCCAAAAACCTTCTTCTCCAGAATTGCGGAATCTTCTGGAATCTACGCGCCGTTCATCGACAGAGACCCGGAAATGTTCTCCCTGCTCCTCTCTCTCCTCCGCACCGGAAACCTTCCCTCAAAGGCCAAAGCTTTCGATATCCAAGACCTAATTATCGAGTCCAAATTCTACGGCATCGAAACCCTCCTCGTCAATTCCCTCTCCAACCCTTCTCAGCTGGAACCTTTCAACCTCCAAAAATCTCTCCTTTTGCCACTCAACGGCCGCGACTCCCCCTCCGCCCTCGCCGCCGACGGCGCCTGCGGCGCCCTCCACGTCGCGCACGGCAGCAAGATCACCTCCTTCGACTGGTCCCTCCGCCGCAAGGCCACCGTCCTCACCCACTTCACCGCGGTGGACTCCCTCCTCGCGCTCTCGCCGACGCTGGTTGCTGCCGGCGCCAACGACTTCTCCGGCCTCCAGATCCTGGACCTCGAAAAAGCCCGCGTCAGGGAAACCCTAAACTGGGAAAACGTCACCAAATCCGGGTCCACCGTCCAGGCCATCGGATCCTCCACGGAAAACATGTTCGTCAGCTTCGAATCCTCGCGCCGAAACTCCAATTCCATATTGGTTTACGATTTGCATACTCTAACCCCCGTCACCGAGATCGGTCACAACGAAATCTTCGGCGCAGACATCGATTCAGCAATTCCCGCGACGAAGTTGCAGTGGATTGAGGGTTACAATTTGTTGATGGCCTCTGGGTCCCACAGTGGGCCCTCCGGCGTCTCCGGTAACATTCGATTGTGGGATGTTCGGTCCGGTAACGTGGTCTGGGAGATTTCGGAGAAGGTGGATTGTTTTGCTGACGTGGCGGTTTCCGATGGGTTGTCGGTAATTTTTAAGGTTGGTGTGAATTCGGGCGAAGCGTCGTACGTGGACATGCGGAATCTGAGCAACGAGAGCACCTGGGTTTGTCTTGGAGATAAAAGAAAGGTAATGAACAGTGGGAAGAAGGAAGGGATTGGCTGCAAAATTAAAACGCAGGGGAATCAAGTGTTTTGCACCAAGGGTGGTGACGTGGAGCTCTGGTCTGAGGTTGTTATGGGCTCTGGAAATACTGGGAGAATCTTCAAGAAGAACTTGATGGGTAGGATGAGGGACATGGGTGGTGCAAAGATTACCAATTTGGCCTTTGGAGGAAGCACCATGTTCTTGACCAGAAAGGATCAGCAATGTGTTGAGGTGTGGCAGAGTTCTTCAAGGGAATTTTGA 1377 0.5389 MPPFAGSEPAGFPKPDSNIVSIDVGGQVFQTTKQTLTSAGPKTFFSRIAESSGIYAPFIDRDPEMFSLLLSLLRTGNLPSKAKAFDIQDLIIESKFYGIETLLVNSLSNPSQLEPFNLQKSLLLPLNGRDSPSALAADGACGALHVAHGSKITSFDWSLRRKATVLTHFTAVDSLLALSPTLVAAGANDFSGLQILDLEKARVRETLNWENVTKSGSTVQAIGSSTENMFVSFESSRRNSNSILVYDLHTLTPVTEIGHNEIFGADIDSAIPATKLQWIEGYNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEISEKVDCFADVAVSDGLSVIFKVGVNSGEASYVDMRNLSNESTWVCLGDKRKVMNSGKKEGIGCKIKTQGNQVFCTKGGDVELWSEVVMGSGNTGRIFKKNLMGRMRDMGGAKITNLAFGGSTMFLTRKDQQCVEVWQSSSREF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2993 458 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 15 456 IPR045068 -
Pvu2g2993 458 SMART BTB_4 18 114 IPR000210 GO:0005515
Pvu2g2993 458 Pfam BTB/POZ domain 20 105 IPR003131 GO:0051260
Pvu2g2993 458 Gene3D Potassium Channel Kv1.1; Chain A 12 114 IPR011333 -
Pvu2g2993 458 Gene3D - 134 458 IPR015943 GO:0005515
Pvu2g2993 458 SUPERFAMILY POZ domain 17 104 IPR011333 -
Pvu2g2993 458 CDD BTB_POZ_KCTD-like 20 97 - -
Pvu2g2993 458 SUPERFAMILY WD40 repeat-like 147 359 IPR036322 GO:0005515
Pvu2g2993 458 PANTHER PROTEIN BINDING PROTEIN 15 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2993 Pvu-Chr2 45385014 45386793 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2993 - - gmx:100792189 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2993 2 45385014 45386793 Pvu2g2993 2 45385014 45386793 ECH