Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2978 ATGGTTGAATCAATTGCCGCCACTTCGCTCCTTGGCCACCGTCCAATTTGTCGTGGAAATTTGGTCAGAGATGTTTCTGTTAAGCGCAAATCTTTGAATTCTTGCCGGCTGCCAGCAACCGACTTTCTTGGTGGTGGACGGATTGTGGTTTCTTTGACTTTGCCTAAATCTGATAAGCAAGATAGGTTTATGTTTTCATCAATTAAGGCCTTGGCTGTGGAGTTAACAAGAGAAGCCCATGCTTATAGGGAAGAGAAATTACCCAATAAAGATAATAACAGGATTGATAGTGGGTTTGATCAAAGGCCTGTTTCTTGGCCTCCGGCTAATAGAGCCGATAACCCCTCCCTCCGCAATCCGTTGCTCCGGCATGAGAGGATGGGGTGTGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGTGTTCTTGTTGAGGACAATTCTGATTTAGAGAAGCAGGCCTGGCTCGCACTCTCCCAAGAAGAAGGCAAATCCTCTCCTCCTGCTTTTATCCTCAAGAGAATAGAAGGCATGAAGAATGAACAGGCGATTTCAGAAGTTTTGTGTTGGTCGAGGGATCCGGTGCAGTTAAGAAGAATGGCTAATAGAAAAGAAGAAATCTACCAAGCTTTGCAGGGTGGAATGTATAGGTTCATGTCTGGTTCCAAGGAGTTTGTTAGTGTTTTGATGCATTACAAGATACCAATGGCATTGGTTTCCACGCGTCCTAGAAAGGCTATTGAGTCTGCTATAGGAGAGATTGGGATCGAAGACAATTTCAGTGTCATTGTAGCAGCAGAGGATGTTCATAGGGGAAAGCCTGATCCTGAAATGTTTGTTTATGCTGCACAGCTTTTGAACTTAATACCTGAGAGGTGCATTGTGTTTGGAAACTCCAATCTAACAGTTGAGGCTGCACACGAAGCACGGATGAAATGTGTGGCCGTTGCTAGCAAGCACCCTGTCTATGAGCTTGGGGCTGCAGACTTGGTTGTCAGACACCTAGACGAGCTTTCTGTAGTTGATTTGAAGAATCTTGCAGACATTGAAATGACTGAATTTGGGTCTCCAGAACCTGAGGTGGAGATGGAGATGGAAAAAGATTATGAGCCATCATCCGTTGATGACATATTCTGGTAA 1137 0.4494 MVESIAATSLLGHRPICRGNLVRDVSVKRKSLNSCRLPATDFLGGGRIVVSLTLPKSDKQDRFMFSSIKALAVELTREAHAYREEKLPNKDNNRIDSGFDQRPVSWPPANRADNPSLRNPLLRHERMGCGWLGAIFEWEGVLVEDNSDLEKQAWLALSQEEGKSSPPAFILKRIEGMKNEQAISEVLCWSRDPVQLRRMANRKEEIYQALQGGMYRFMSGSKEFVSVLMHYKIPMALVSTRPRKAIESAIGEIGIEDNFSVIVAAEDVHRGKPDPEMFVYAAQLLNLIPERCIVFGNSNLTVEAAHEARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIEMTEFGSPEPEVEMEMEKDYEPSSVDDIFW* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2978 378 CDD HAD_BPGM-like 195 317 - -
Pvu2g2978 378 Gene3D - 134 332 IPR023214 -
Pvu2g2978 378 SUPERFAMILY HAD-like 134 337 IPR036412 -
Pvu2g2978 378 MobiDBLite consensus disorder prediction 357 378 - -
Pvu2g2978 378 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 372 - -
Pvu2g2978 378 Gene3D Putative phosphatase; domain 2 144 217 IPR023198 -
Pvu2g2978 378 MobiDBLite consensus disorder prediction 84 113 - -
Pvu2g2978 378 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 372 - -
Pvu2g2978 378 Pfam Haloacid dehalogenase-like hydrolase 139 315 IPR041492 -
Pvu2g2978 378 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 250 315 IPR006439 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2978 K22912 - gmx:100798181 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2978 2 45260262 45262193 Pvu2g2978 2 45260262 45262193 ECH