Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2967 ATGGAAGAAGAGAACAAAATAACAAAAGGAAAATATGCTGCTGATATTTCCTCCATAAAAGAAGCACATGCCCGAATCAAATCATTGGTTCATAAAACTCCGGTTCTGTCCTCCACCTCGCTGAATGTTATGTCAGGAAGGCAGCTCTACTTTAAGTGTGAAAGTTTACAAAAGGGGGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCTGTGTTCTCTCTCAATGATGAAGATGCTTCTAAAGGGGTTGTGACACACAGCAGTGGAAACCATGCTGCAGCATTGGCTTTGGCTGCTAAACTACGGGGGATCCCTTCATATATTGTTATTCCAAAAAATGCCCCAACTTGCAAAATTGAGAATGTAAAGCGGTATGGTGGTCAGATTGTCTGGTCTGAGGCCTCTGTTCAATCCAGAGAAGAAGTTGCAAACAAAGTGTGGCAAGAAACTGGTGCTATCTTTATACATCCGTACAATGATGGACGCATATTAAGTGGCCAGGGTACCATATCCTTGGAGATTCTGGAGCAAGTCCCACATATAGATACGCTAGTGGTACCCATAAGTGGTGGTGGTTTGATATCTGGAATAGCATTGGCTGCCAAGTCCATCAACCCAGCTATTCGTATTTTTGCTGCTGAACCTAAAGGGGCTAATGATGCTGCACTATCTAAAGCAGCTGGGAGGATAATTAGATTGCCTGAGACAGATACTATAGCTGATGGTCTTCGAGCATTTCTTGGAGATTTCACGTGGCCTGTAGTACGAGATCTTGTTGAGGACATTATAACTGTTGAAGACAGTGAAATAATAAAAGCTATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTAGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGACACCTTCCAGAAGAATCCTTCTTGGAAGGAATGCAACCATATAGGAATAGTAGTTTCAGGAGGCAATGTTGATCTGGCTGTGCTTTGGGATTCTTTGAAGAAGGGAAAATGA 1008 0.4236 MEEENKITKGKYAADISSIKEAHARIKSLVHKTPVLSSTSLNVMSGRQLYFKCESLQKGGAFKFRGACNAVFSLNDEDASKGVVTHSSGNHAAALALAAKLRGIPSYIVIPKNAPTCKIENVKRYGGQIVWSEASVQSREEVANKVWQETGAIFIHPYNDGRILSGQGTISLEILEQVPHIDTLVVPISGGGLISGIALAAKSINPAIRIFAAEPKGANDAALSKAAGRIIRLPETDTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPSWKECNHIGIVVSGGNVDLAVLWDSLKKGK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2967 335 CDD Thr-dehyd 16 323 - -
Pvu2g2967 335 PANTHER - 31 333 - -
Pvu2g2967 335 PANTHER - 5 42 - -
Pvu2g2967 335 Gene3D - 22 323 IPR036052 -
Pvu2g2967 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 5 42 - -
Pvu2g2967 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 31 333 - -
Pvu2g2967 335 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Pvu2g2967 335 Gene3D - 62 158 IPR036052 -
Pvu2g2967 335 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Pvu2g2967 335 Pfam Pyridoxal-phosphate dependent enzyme 29 318 IPR001926 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2967 K12235 - gmx:100799758 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2967 2 45169105 45172038 Pvu2g2967 2 45169105 45172038 ECH