Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2953 ATGGTTTCCCCCTCCCAAAAGATTCTGGTCACCGGTGGTGCCGGTTTCATAGGCACCCACACCGTCGTGCAGCTCCTCAAAGGAGGCTTCGCTGTTTCAATAATCGACAATTTCGACAACTCCGTCATGGAAGCGGTCGACCGGGTACGCCAGGTGGTGGGCCCTCATCTTTCTCAGAACCTCGAATTCACCAAGGGCGATCTCAGAAACAGGGACGACTTGGAGAAACTCTTCTCCAGGACCACATTCGATGCCGTTATCCACTTCGCTGGCCTCAAGGCGGTTGCGGAAAGCGTGGCGAAGCCGCGTCGCTACTTTGATTTCAATTTGGTCGGCACCATCAATCTCTACGAAGTTATGGCCAAGTATAACTGTAAAAAGATGGTTTTTTCATCTTCTGCAACCGTTTATGGCCAACCTGAAAAGATACCGTGTGAGGAGGATTTCAAGTTGCATGCTATGAATCCATATGGACGGACCAAGCTTTTCCTTGAAGAAATTGCCCGAGATATTCAGAAAGCCGAGCCAGAATGGAAGATCATATTACTGAGATACTTCAATCCAGTTGGGGCTCATGAAAGTGGTAAACTCGGTGAAGATCCCAAGGGCATCCCAAATAATCTCATGCCTTACATTCAGCAAGTAGCTGTTGAAAGGTTGCCTGAACTCAATGTATACGGTCATGATTATCCAACCAGGGATGGCTCTGCGATCCGGGACTATATCCATGTGATGGACTTAGCAGATGGTCACATTGCTGCCTTGAGAAAGCTCTTCACATCGGATAACATAGGTTGTACTGCTTACAACCTGGGAACCGGTCGTGGAACATCTGTGCTTGAAATGGTTGCAGCATTTGAAAAGGCTTCTGGCAAGAAAATTCCAGTAAAATTATGTCCAAGAAGACCAGGAGATGCTACGGAGGTTTATGCATCTACACAGAGAGCTGAGACAGAGCTTGGTTGGAAGGCAAAATATGGTGTGGAGGAGATGTGCAGGGACCAGTGGAATTGGGCAAAGAACAATCCCTGGGGTTACACGGGGAAGCCTTGA 1053 0.4815 MVSPSQKILVTGGAGFIGTHTVVQLLKGGFAVSIIDNFDNSVMEAVDRVRQVVGPHLSQNLEFTKGDLRNRDDLEKLFSRTTFDAVIHFAGLKAVAESVAKPRRYFDFNLVGTINLYEVMAKYNCKKMVFSSSATVYGQPEKIPCEEDFKLHAMNPYGRTKLFLEEIARDIQKAEPEWKIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVERLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTSDNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPVKLCPRRPGDATEVYASTQRAETELGWKAKYGVEEMCRDQWNWAKNNPWGYTGKP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2953 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 346 IPR036291 -
Pvu2g2953 350 CDD UDP_G4E_1_SDR_e 7 340 IPR005886 GO:0003978|GO:0006012
Pvu2g2953 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 4 349 - -
Pvu2g2953 350 TIGRFAM galE: UDP-glucose 4-epimerase GalE 7 343 IPR005886 GO:0003978|GO:0006012
Pvu2g2953 350 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Pvu2g2953 350 Gene3D - 8 279 - -
Pvu2g2953 350 Gene3D - 197 339 - -
Pvu2g2953 350 PANTHER BIFUNCTIONAL UDP-GLUCOSE 4-EPIMERASE AND UDP-XYLOSE 4-EPIMERASE 1 4 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2953 Pvu-Chr2 45061804 45064669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2953 8 338 Miscellaneous Gene Families AT4G00110 27.841 5.22e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2953 K01784 - gmx:100781806 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2953 2 45061804 45064669 Pvu2g2953 2 45061804 45064669 ECH