Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2936 ATGGATGCAATTAACAACCTACTCAACATTGCATTGCCTCCACTTTCCCTCATATTCCTCTCCATTTTAATGCTACCTTGGCTCATATTCAAGCAGCTTGTTCATGTAAGAAAATCACTAAACAAGGAAAACGTGGCAAGCAAAGTTGTATTAATCACCGGAGCAGCCTCAGGAATTGGCGAGGAAATAGCGTATGAATATGCAAGGCGAGGAGCAAAGCTTTCCCTGGTTGACATCAGAAAGGAGAAGCTCGAGGCAGTGAGTGATAAGGCACGATCTCTGGGTTCTCCTGATGTTACCATCATTGGTGCTGATGTATCCAAGGTTCAAGACTGCAAACGCTTGGTTGATGAAACTATCAACTACTTTGGAAGACTGGATCATCTGGTAAATAATACGGGAATCAGCGGTAAGCCTACGAGGGTGGAGAATTTGCGTCATGTTTCCGACTGTGCTGCAGTTATG 465 0.443 MDAINNLLNIALPPLSLIFLSILMLPWLIFKQLVHVRKSLNKENVASKVVLITGAASGIGEEIAYEYARRGAKLSLVDIRKEKLEAVSDKARSLGSPDVTIIGADVSKVQDCKRLVDETINYFGRLDHLVNNTGISGKPTRVENLRHVSDCAAVM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2936 155 PANTHER RETINOL DEHYDROGENASE-RELATED 1 155 - -
Pvu2g2936 155 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Pvu2g2936 155 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Pvu2g2936 155 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 1 155 - -
Pvu2g2936 155 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 139 IPR036291 -
Pvu2g2936 155 Pfam short chain dehydrogenase 48 138 IPR002347 -
Pvu2g2936 155 Gene3D - 30 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2936 Pvu-Chr2 44873503 44874235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2936 45 131 Acyl Lipid Metabolism Gene Families AT3G12800 41.379 1.48e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2936 K22418 - pvu:PHAVU_002G2852000 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2936 2 44873503 44874235 Pvu2g2936 2 44873503 44874235 ECH