Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2935 GATGTAAATTTTTGGGGAGCAGTTAATGTGACGTTATATGCGATCCCACATCTGAAAATTAACAAAGGGAAGATCATAGTGACTGCTTCAGTTTGCGGATGGTTTCCAGTACCACTGATAAGTATCTATAATGCTAGCAAAGCAGCAATAATAAGCTTCTTTGAGACTCTGAGAATGGAAGCTGGTTCTGCTATCGGCATAACAATTGCCACGCCGGGTCTTATCAAGACGGACCTTAGTAGGGCAGCGAAATCTGACTTCAAGGTTGCTATGGAAAGAGTTCCAATGGCGTCAGCTAGTGAGTGTGCTAAAGCCATAGTTGAGAGTGCATGCAGGGGAGACATGTATGTTACATATCCATCCTGGTACAGAGTGTTGTTTCCATGGAAGCTGCTTCATCCTCAATTCGTAGATTGGTTCTGCAACTTAGTCAATAGGCCTTATCCGAAGAAATCTGCCATGAAAACCAATCTCAAGATGCCAGAGCATAAGACAGAATAA 501 0.4291 DVNFWGAVNVTLYAIPHLKINKGKIIVTASVCGWFPVPLISIYNASKAAIISFFETLRMEAGSAIGITIATPGLIKTDLSRAAKSDFKVAMERVPMASASECAKAIVESACRGDMYVTYPSWYRVLFPWKLLHPQFVDWFCNLVNRPYPKKSAMKTNLKMPEHKTE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2935 166 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 142 IPR036291 -
Pvu2g2935 166 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 30 58 IPR020904 GO:0016491
Pvu2g2935 166 Gene3D - 1 148 - -
Pvu2g2935 166 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 1 145 - -
Pvu2g2935 166 PANTHER RETINOL DEHYDROGENASE-RELATED 1 145 - -
Pvu2g2935 166 Pfam short chain dehydrogenase 1 85 IPR002347 -
Pvu2g2935 166 PRINTS Glucose/ribitol dehydrogenase family signature 17 33 IPR002347 -
Pvu2g2935 166 PRINTS Glucose/ribitol dehydrogenase family signature 43 62 IPR002347 -
Pvu2g2935 166 PRINTS Glucose/ribitol dehydrogenase family signature 63 80 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2935 Pvu-Chr2 44865293 44866721 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2935 K22418 - pvu:PHAVU_002G2852001 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2935 2 44865293 44866721 Pvu2g2935 2 44865293 44866721 ECH