Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2922 ATGCCGGAAGAGGATTTGGTTGACATCAAGTTTAGGTTGTACGATGGCTCCGACATCGGACCCTTTAGGTATTCATCCGCCGCCACCGTCGATATGCTAAAGCAGAGGATTGTCTCCGATTGGCCCAGAGGTAAAACGGTTGTGCCAAAGTCAGCTAATGAAGTGAAATTGATTAATTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAATGTAAAGTACCATTTGGTGAAATTGCTGGGAGTATTATAATAATGCATGTTGTTGTACAGCCATCTCTAGCTAAAACTAAAGCTGAAAAGAAGGTTGATGATTCGCCCAAGAAGGTTGTCTGTTCTTGTTCCATATTATGA 357 0.4146 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPRGKTVVPKSANEVKLINSGKILENNKTVGQCKVPFGEIAGSIIIMHVVVQPSLAKTKAEKKVDDSPKKVVCSCSIL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2922 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Pvu2g2922 118 CDD Ubl_MUBs_plant 6 93 - -
Pvu2g2922 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Pvu2g2922 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 118 - -
Pvu2g2922 118 Gene3D - 1 100 - -
Pvu2g2922 118 SUPERFAMILY Ubiquitin-like 2 97 IPR029071 -
Pvu2g2922 118 PIRSF MUB 1 118 IPR017000 -
Pvu2g2922 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2922 Pvu-Chr2 44765594 44772781 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2922 - - vra:106768304 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2922 2 44765594 44772781 Pvu2g2922 2 44765594 44772781 ECH