Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2889 ATGGGCATGAGGAAATTGAGTTTTTTGGGGTTTCTTTGTGCCTATTTTCTCTTTACAATTGGTGCTGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTATATATGAACTTCCAAGTAAGTATAATAAGAAAATTCTCCAAAAAGACCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGATTTCTCTTATCTAGCCCTGTCAGAACCCTTAATCCGGAAGAGGCTGACTGGTTTTATACCCCTGTATACTCCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAGTCACCACGAATGATGAGAAGTGCCATACAACTTATTTCTTCAAACTGGCCTTATTGGAACCGCACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCACGACTTTGGGGCATGTTTTCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTCAACTGCTACGGCGTGCTACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATTACCATTCCTCCATACGCTCCACCACAGAAAATGCACACCCACCTAATTCCCGACAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTTTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGAACAATCCTCTATTTGACGTCTCCACTGAGCATCCAACCACGTACTATGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTGTTATTATTGCAGATGACATTGTGCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAGGAGAAGGTTCCAAACTTGGATACCATACTCACATCTATCTCACCAGAAGTCATATTAAGGAAGCAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCTGGAGACGCCTTCCATCAAGTTTTAAATGGACTGGCAAGGAAGCTGCCACATGACAACACCGTGTTCTTGAAACCAGGGGAGAAGTTCTTGAATTGGACTGCTGGACCTGTGGGTGACCTCAAACCTTGGTAA 1251 0.45 MGMRKLSFLGFLCAYFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFIYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYSTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDVSTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEKVPNLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKFLNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2889 416 Pfam Exostosin family 49 344 IPR040911 -
Pvu2g2889 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Pvu2g2889 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2889 Pvu-Chr2 44460846 44464200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2889 K20870 - gmx:100812747 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2889 2 44460846 44464200 Pvu2g2889 2 44460846 44464200 ECH
Pvu2g2889 2 44460846 44464200 Pvu9g1629 9 22897312 22899716 PCT
Pvu9g1659 9 23249724 23254293 Pvu2g2889 2 44460846 44464200 PCT