Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2888 ATGATAGTTTTGAACATTCATTATAAAATTGGCATGGCAATGGCAGTGGCAATGGCTTCAACCTCTGCATTTCCTTTGTCAACTACAAGCTTTTTCACTCCTCAAACATGGCTTCACAATCGACCCTTTAGGTTGCGGTGTCTGAGAGGAACAATGGAACATAACAGTAATGGGGCAAAGATCAAAAGCACTATTCTTCACCATCTCTTCCACAAGCAGAGACAGAGTCCTTACTATGACAATCTATGCCACCCTGTTTCAGATTTGCTTCCATTCATTGACAATGGGATCAGAGGTGTCACCACCAATCCAGCGATCTTTGAGAGAGCTATTTCATCCTCAAATGCCTACAACGAACAGCTGAGGAAATTGGTAGGGGCAGGGAAAGACATAGAGAGTGCCTATTGGGAATTGGTAGTGCAAGACATACATGATACTTGCAAACTCTTGGAGCCAATTTACAATGATTCAGATGGGGTAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTAGCAAATGATACCAAGGGGACAATTGAAGAGGCAAAATGGCTTCATAAGATGATTGGGTGTTCAAATGTTTACATTAAAATTCCTGCAACAGATGAATCCATCCTTTCTATGAAGGAGGTTATTTCTCTGGGGATAAGTGTAAATGCCACTCTCATATTTTGCCTCCAAAGATATGAAGCAGTGATTGATGCTTACTTGGATGGCCTTGAGGCTTGTGGCAGGACTGATCTCTCCAAGGTTTCAAGTGCAGCAGCATTCTACATCAGTAGAGTGGATTCTATACTTGACAAAAAACTTGAGCAAATTGGTACCTCTGAGGCTCTTGATCTCAAAGGAAAGGGTGCGATTGCTCAAGCAGTCTTAGCTTACCAACTTTATCAGAAAAAGTTTTCTGGTGCAAGATGGGAACACTTGGAGAAGAAAGGTGCAAAAAAGCAGAGGTTGATGTGGGCTTCAACAAATGTGAAAACTCCAGCTTACCTTGACACATTTTATGTTGATTCTCTTATTGGACCAGATACTATTTCAACCATACCAGACCAAGCTCTTAAAGCCTTCATGGACCATGGTATTCTTTCAAGAACTCTTGATGCAAGAGTATCAGAGGCACAAGACATTTACAATGCAATTCAGAAGTTGGGTATTGATTGGGGTTCTGTTGGATCACAACTGGAACATGAGGTGCTGGATTCCTTCACAAAAAGCTTTCACAATGTGCTTCAATGCATTCACAACAAAACACTAGTACAAGTCTAA 1272 0.4135 MIVLNIHYKIGMAMAVAMASTSAFPLSTTSFFTPQTWLHNRPFRLRCLRGTMEHNSNGAKIKSTILHHLFHKQRQSPYYDNLCHPVSDLLPFIDNGIRGVTTNPAIFERAISSSNAYNEQLRKLVGAGKDIESAYWELVVQDIHDTCKLLEPIYNDSDGVDGYVSVAVSPKLANDTKGTIEEAKWLHKMIGCSNVYIKIPATDESILSMKEVISLGISVNATLIFCLQRYEAVIDAYLDGLEACGRTDLSKVSSAAAFYISRVDSILDKKLEQIGTSEALDLKGKGAIAQAVLAYQLYQKKFSGARWEHLEKKGAKKQRLMWASTNVKTPAYLDTFYVDSLIGPDTISTIPDQALKAFMDHGILSRTLDARVSEAQDIYNAIQKLGIDWGSVGSQLEHEVLDSFTKSFHNVLQCIHNKTLVQV* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2888 423 SUPERFAMILY Aldolase 78 418 - -
Pvu2g2888 423 Pfam Transaldolase/Fructose-6-phosphate aldolase 93 413 IPR001585 GO:0005975
Pvu2g2888 423 Hamap Transaldolase [tal]. 71 423 IPR004732 GO:0004801|GO:0005737|GO:0006098
Pvu2g2888 423 ProSitePatterns Transaldolase signature 1. 99 107 IPR018225 GO:0005975
Pvu2g2888 423 TIGRFAM tal_mycobact: transaldolase 88 413 IPR004732 GO:0004801|GO:0005737|GO:0006098
Pvu2g2888 423 PANTHER TRANSALDOLASE-RELATED 57 420 - -
Pvu2g2888 423 Gene3D Aldolase class I 65 419 IPR013785 -
Pvu2g2888 423 CDD Transaldolase_like 76 408 IPR004732 GO:0004801|GO:0005737|GO:0006098
Pvu2g2888 423 PIRSF Trnald_Bac_Plnt 55 422 IPR004732 GO:0004801|GO:0005737|GO:0006098
Pvu2g2888 423 PANTHER TRANSALDOLASE 57 420 IPR001585 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2888 Pvu-Chr2 44455832 44458943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2888 K00616 - gmx:100811673 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2888 2 44455832 44458943 Pvu2g2888 2 44455832 44458943 ECH