Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2887 ATGGCATTGCAGGCACCAAGTCTTCACTGCGCCCCCAGCGTCAATGGTGGCCTGCGAAGACCCTCCGTCAACCCTTTTGCTCTCAAGTCCTCCTTCTTCTCTGGTTCACACAACCTTCTTCTTCATCCCAATCACCACCACCTCACTTCAGCACCACCCAGGATTTCCATGCGCGTTGCTTCCAAACAGGCCTATATCTGTCGCGATTGCGGGTATATTTACAATGACAGGACTCCCTTTGAAAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGATTTAAGACCTATGCACCTGCTGTCAATAAAGATGCCAATAGCACAGATGTTAGAAAGGCACGAAAAGCTGAACTAAAGAGAGATGAAGCAATTGGGAAAGCACTTCCTATTGCAGTTGTCGTGGGAATTGCAGTGCTTGCTGGATTATATTTCTATCTGAATAGCCAATACTAG 468 0.4701 MALQAPSLHCAPSVNGGLRRPSVNPFALKSSFFSGSHNLLLHPNHHHLTSAPPRISMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFKTYAPAVNKDANSTDVRKARKAELKRDEAIGKALPIAVVVGIAVLAGLYFYLNSQY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2887 155 Pfam Rubredoxin 65 99 IPR024935 GO:0005506
Pvu2g2887 155 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 2 155 - -
Pvu2g2887 155 Gene3D - 62 101 - -
Pvu2g2887 155 SUPERFAMILY Rubredoxin-like 62 104 - -
Pvu2g2887 155 ProSiteProfiles Rubredoxin-like domain profile. 62 102 IPR024934 GO:0005506
Pvu2g2887 155 CDD rubredoxin 65 100 IPR024935 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2887 Pvu-Chr2 44452421 44454491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2887 - - gmx:100812204 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2887 2 44452421 44454491 Pvu9g1658 9 23246280 23247447 PCT