Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2875 ATGGGAGGAGCTTCTGCAGATCTTCACCAACTTGAATCAGACATAGAACTAACTCATGCTGAAAGGACTGACACCAAGTTAGGGGCTTCAGAGTCAAAAGCTGCCAATGATGTTGGACTTGACAGTGGCATCAAATCTCAGGCTGAAGCTGAAGGACACTTTGTTGAGGTCACCATGGACATTCATGGTGATTCTGTGGCCTTGCACAGTGTTAAAGCTTTTGGGGGTGTTGATGTGGTGGAAGAGGAGGGTGAGAAGTTGGGTTTGACAGGGAAGAGGTTTGAGAAGAAAAAATCCTTCAGTGCCTCTGTGGTTCAGAGTGCTGCTATCCGCATGAAGCAGCTGAAGCGTTTGACTTCTTTCTCCAAACCAGCTCCTAAACACTTTGAAAGAACAAAGTCTGCAGTGGCTCATGCTCTCACAGGGCTCAAGTTTATCAGCACGACCGATGGGGGTGAAGGATGGATTAAGGCGGAGGGGCGGTTTAAGAAGTTTGTTGGTGCTGATGGCTATCTTCCTCGTGCTCGCTTTGCAGAATGCTTAGGATTGAACAAGGAGTCCGAGGCTTATGCAGAGAAGCTTTTTGATACTCTTGCTAGACAGAGAGGTATTCAAGGGGGGTCCATTAACCATATCCAGTTTAAGGAGTTCTGGGACAATATTTCTGACCAGAGCTTTGATGCTAGGCTCAAAACATTCTTTGACATGGTTGATAAAGATGCAGATGGAAGAATCACCGAGGAAGAAATTAAAGAGATTATCTGCCTTAGCGCCACTGCCAACAAACTGTCAATCATTCAGAAGCAAGCAGAGGAATATGCAGCTTTAATCATGGAAGAACTGGACCCTGATGACTCTAAATACATCATGATAGACGACCTGGAGACACTTTTGTTGCATGGACCAGAGGAAACTACAAGAGGAGAAAGCAAGAACCTAAGTCGAATGCTAAGCCAAAAGCTTAAGCCTACATACGTGGACAATACAATTATGAAGTGGTATAGGGATGGCAGGTACTTTTTTCTGGACAATTGGCGAAGATCTTGGGTACTTGTCCTGTGGATTGGTGTGATGTTAGGCCTATTTGCCTATAAATTTGTGCAATATCGGAGAAAAGCTGCCTATGAGGTAATGGGCCATTGTGTATGCATGGCGAAAGGTGCAGCAGAGACACTTAAATTGAACATGGCTCTCATCTTACTACCTGTTTGCCGAAACACCATCACCTGGCTCAGGAATAAGACCAAACTAGGTGCTGTAGTTCCTTTTGACGACAACATCAACTTCCACATGGTAATAGCTGTGGCAATAGCATTTGGTGTTGGTGTACATGCCATCTATCATCTTAGTTGTGATTTTCCTCGCCTTCTTCATGCAAGTGATGAAAAGTACAAGCTGATGGAACCCTTTTTCGGAGAGAGACCATCAGATTATTGGTATTTTGTCAAATCATGGGAAGGAGTAACAGGGATTATAATGATTGTGCTGATGGCAATAGCTTTTACGTTGGCCAATCCTGCATTCAGGAGAGGCAGGACCAAACTTCCCAAACCCTTCGACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCATCTCTTCGTCTTTGTCTATGCCCTCTTGGTTGTGCATGGAATCAAACTTTACTTGACTACGGAATGGTACAAGAAAACGACATGGATGTATCTGGCTGTTCCCATTACCATTTATGCATTGGAAAGACTCACTAGAGCACTGAGATCAAGCATTAAGTCTGTCAAAATATTGAAGGTGACTCTTTATCCTGGAAATGTGTTATCACTTCAAATGTCAAAGCCGCAGGGGTTTACCTACAAAAGTGGACAATACATGTTTGTCAATTGTGCTGCTGTGTCTCCATTCGAATGGCATCCATTTTCCATAACTTCAGCCCCTGATGATGATTACCTTAGCGTTCACATAAAAATAGTTGGTGATTGGACCCGAAGCCTGAAAACCAAATTCTCACAGGCATGCCAACAACCCCTCAACGGGCAAAGTGGACTTCTAAGAGCAGAGTGCTTGAAAGAAGATAACAGTTCAGTATCTTTCCCGAAAGTGCTGGTTGATGGACCATACGGGGCTCCAGCACAGGACTACAGGGAGTACGAGGTGGTTCTGCTGGTGGGGCTAGGAATAGGGGCTACCCCAATGATAAGCATTGTGAAGGACATGGTGAAGATGTTGAAGGAGATAGAGGAGGAAGAGGAGAGGGGAATGGAGGAGGGAGCAGCAGGAGCAGTGAAGAGTGATGATGAGTTCAAGACAAGAAGGGCATACTTCTACTGGGTGACCAGAGAGCAGGGTTCCTTCGACTGGTTCAAAGGGGTGATGAACGAGGTGGCGGAAGAGGATCGAAAGAAGGTGATCGAGCTCCACAGCTACTGCACCAGCGTCTACGAAGAAGGTGATGCTCGCTCTGCTCTCATTGCCATGCTGCAGTCCATCAACCATGCCAAGAACGGCCTCGACATTGTCTCTGGCACTCGCGTGATGTCTCACTTCGCCAAACCCGATTGGCGCAATGTCTTCAAACGCATTGCCCTTAACCATCCACATGGTCGTGTTGGGGTGTTTTACTGTGGGCCATCAAACCTCACTCGTGAGCTTCGTCAGCTGTCTTTGGATTTCTCTCACAACACATCCACCAAGTTTGATTTCCACAAAGAAAATTTCTGA 2700 0.4567 MGGASADLHQLESDIELTHAERTDTKLGASESKAANDVGLDSGIKSQAEAEGHFVEVTMDIHGDSVALHSVKAFGGVDVVEEEGEKLGLTGKRFEKKKSFSASVVQSAAIRMKQLKRLTSFSKPAPKHFERTKSAVAHALTGLKFISTTDGGEGWIKAEGRFKKFVGADGYLPRARFAECLGLNKESEAYAEKLFDTLARQRGIQGGSINHIQFKEFWDNISDQSFDARLKTFFDMVDKDADGRITEEEIKEIICLSATANKLSIIQKQAEEYAALIMEELDPDDSKYIMIDDLETLLLHGPEETTRGESKNLSRMLSQKLKPTYVDNTIMKWYRDGRYFFLDNWRRSWVLVLWIGVMLGLFAYKFVQYRRKAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGAVVPFDDNINFHMVIAVAIAFGVGVHAIYHLSCDFPRLLHASDEKYKLMEPFFGERPSDYWYFVKSWEGVTGIIMIVLMAIAFTLANPAFRRGRTKLPKPFDKLTGFNAFWYSHHLFVFVYALLVVHGIKLYLTTEWYKKTTWMYLAVPITIYALERLTRALRSSIKSVKILKVTLYPGNVLSLQMSKPQGFTYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIKIVGDWTRSLKTKFSQACQQPLNGQSGLLRAECLKEDNSSVSFPKVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISIVKDMVKMLKEIEEEEERGMEEGAAGAVKSDDEFKTRRAYFYWVTREQGSFDWFKGVMNEVAEEDRKKVIELHSYCTSVYEEGDARSALIAMLQSINHAKNGLDIVSGTRVMSHFAKPDWRNVFKRIALNHPHGRVGVFYCGPSNLTRELRQLSLDFSHNTSTKFDFHKENF* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2875 899 Pfam FAD-binding domain 585 703 IPR013112 GO:0016491
Pvu2g2875 899 PANTHER RESPIRATORY BURST OXIDASE-LIKE PROTEIN D 43 899 - -
Pvu2g2875 899 SUPERFAMILY EF-hand 156 302 IPR011992 -
Pvu2g2875 899 ProSitePatterns EF-hand calcium-binding domain. 238 250 IPR018247 -
Pvu2g2875 899 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 708 899 IPR039261 -
Pvu2g2875 899 CDD NOX_Duox_like_FAD_NADP 589 899 - -
Pvu2g2875 899 Pfam Ferric reductase like transmembrane component 387 543 IPR013130 -
Pvu2g2875 899 SUPERFAMILY Riboflavin synthase domain-like 586 702 IPR017938 -
Pvu2g2875 899 PRINTS Cytochrome B-245 heavy chain signature 433 451 IPR000778 GO:0016020|GO:0016491
Pvu2g2875 899 PRINTS Cytochrome B-245 heavy chain signature 525 545 IPR000778 GO:0016020|GO:0016491
Pvu2g2875 899 PRINTS Cytochrome B-245 heavy chain signature 692 705 IPR000778 GO:0016020|GO:0016491
Pvu2g2875 899 PRINTS Cytochrome B-245 heavy chain signature 715 732 IPR000778 GO:0016020|GO:0016491
Pvu2g2875 899 Pfam Ferric reductase NAD binding domain 710 881 IPR013121 GO:0016491
Pvu2g2875 899 PANTHER NADPH OXIDASE 43 899 - -
Pvu2g2875 899 Gene3D - 129 246 - -
Pvu2g2875 899 Gene3D Translation factors 572 674 - -
Pvu2g2875 899 Gene3D - 701 899 IPR039261 -
Pvu2g2875 899 Pfam Respiratory burst NADPH oxidase 129 228 IPR013623 GO:0004601|GO:0050664
Pvu2g2875 899 SFLD NADPH oxidase subgroup (NOX) 98 899 - -
Pvu2g2875 899 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 577 706 IPR017927 GO:0016491
Pvu2g2875 899 ProSiteProfiles EF-hand calcium-binding domain profile. 225 260 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2875 Pvu-Chr2 44369387 44374899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2875 45 899 Miscellaneous Gene Families AT5G51060 63.982 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2875 K13447 - gmx:100808271 1522.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2875 2 44369387 44374899 Pvu2g2875 2 44369387 44374899 ECH
Pvu2g2875 2 44369387 44374899 Pvu9g1644 9 23086395 23091819 PCT