Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2809 ATGCACCTTCACAAGCTTTATAGCATTCCTTCTTCTTTCGGGAATGCCTTCTTTCTGGTGGGTCATCGTGTTTTGGACCTAAGAGCGTGTAATGATTGTTTATGCCGCAAGAATCGGAGATGGTTCGGTGCGTCCATTTCGTGTTCGGGTGTTAGGAATGATTTCCCTTCCATTGAACAGCTTAGTGATGCACGGGTTATATACTCTGTCGCTGCATCTATGGGACACAATCAGGAGTCTCATCCAGAATCACATTTTCGAGTTCCTGCAATTGTGAATGCTCTAGAAGAAATGCAGCTCTCCTCAAAGTTCCGTGGCTCTGAGTTAATTGAACTTCAACATTTTGAGCCTGCTTCAGTAGATGATATAGCAAGCGTGCATGCAAGAGCCTATGTTACTGGACTTGAAAAGGTTATGGATCAAGCAGTGGAGAAGGGCCTTCTTTTCGTTGAAGGTTCTGGACCAACATATGCCACTGCCACTACCTTTCAGGAGTCAAAAATTGCAGCTGGTGCTGGACTAGCCTTAGTTGACTCAGTGGTTGCGGGTTCAAAGATAAAGAGTGATGCACCCACTGGTTTTGCTCTGATAAGACCGCCAGGACATCACGCAGTTCCACAAGGACCTATGGGCTTCTGCATTTTCAGCAACGTGGCCATTGCAGCCCGTCATGCTCAGCGTGTTCATGGACTGAAGCGTGTGTTTATTATTGATTTTGATGTTCATCATGGAAATGGAACAAATGATGCTTTTTATAATGATCCAGATGTATTTTTCCTTTCGTTTCATCAAGATGGAAGCTACCCAGGTACTGGTAAATTTCATGAAGTGGGAAGTGGAGATGGTGAAGGAACCACATTAAATCTGCCGCTTCCTGGGGGCTCAGGCGATACTGCTATTAGAACCGTGTTCGATGAAGTTATTGTACCATGTGCTCAAAGATTTAAACCAGACATCATTCTTGTTTCTGCTGGGTACGACGGCCACGTCTTGGATCCACTCGCAAATCTTCAATATACAACTGGAACATACTACATGCTAGCGTCCAGTATTAAAGAACTAGCGAGAGATTTATGTGGAGGGCGATGTGTGTTTTTCTTGGAGGGAGGATATAATCTGAAGTCTCTATCATATTCCGTGGCAGACACATTCCGTGCTCTTCTTGGTGATCGAAGCTTGGCATCTGAGTTTGATGACCCTAACATTTTGTACGAAGAGCCATCTACAAAAGTTAAGCAAGCAATTCAGAGGATAAAACACATTCATTCCCTTTGA 1275 0.4416 MHLHKLYSIPSSFGNAFFLVGHRVLDLRACNDCLCRKNRRWFGASISCSGVRNDFPSIEQLSDARVIYSVAASMGHNQESHPESHFRVPAIVNALEEMQLSSKFRGSELIELQHFEPASVDDIASVHARAYVTGLEKVMDQAVEKGLLFVEGSGPTYATATTFQESKIAAGAGLALVDSVVAGSKIKSDAPTGFALIRPPGHHAVPQGPMGFCIFSNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYNDPDVFFLSFHQDGSYPGTGKFHEVGSGDGEGTTLNLPLPGGSGDTAIRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKELARDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDRSLASEFDDPNILYEEPSTKVKQAIQRIKHIHSL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2809 424 PRINTS Histone deacetylase superfamily signature 199 222 IPR000286 -
Pvu2g2809 424 PRINTS Histone deacetylase superfamily signature 233 248 IPR000286 -
Pvu2g2809 424 PRINTS Histone deacetylase superfamily signature 317 327 IPR000286 -
Pvu2g2809 424 PANTHER HISTONE DEACETYLASE 44 423 - -
Pvu2g2809 424 Pfam Histone deacetylase domain 81 386 IPR023801 -
Pvu2g2809 424 PANTHER HISTONE DEACETYLASE 14 44 423 - -
Pvu2g2809 424 CDD HDAC_classII 81 388 - -
Pvu2g2809 424 SUPERFAMILY Arginase/deacetylase 76 391 IPR023696 -
Pvu2g2809 424 Gene3D Histone deacetylase domain 57 423 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2809 Pvu-Chr2 43796422 43802594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2809 - - gmx:100788664 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2809 2 43796422 43802594 Pvu2g2809 2 43796422 43802594 ECH