Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2778 ATGGACGCGGAGCTGAGGTCAGCGAAAGCGGCGTACCGGAACGCGAATGCTGAGGGAAACCACCGGGAGGAGGCGCGGTGGGCCAACGTCATCGCCGACATAATGAAAAAGCGTGGAGATTACGTCATTGCCCTGAACTGGCTCCGAATCGATTACGAAATTTCGCTCAAACATTTACCGGAGAAGCACTTGCTCCCGACCTGCCAATCCCTCGGCGAAATGTACCTCCGCCTCGAAGAGTTCCCCGACGCCCTAATTTTCCAGAAAAAGCACTTAGAGCTCGCGAGAGACGCAAACGACATCGTCGAGGAGCAGCGAGCGACCACGCAACTCGGACGCACTTACCACGAACTGTTCTCGCGATCGGATCACGACCACAACTCTATTCGCAACGCGAAGAAGTACTTCAAGTGCGCGATGGATCTCGCGGTGAAGCTCAAGGAGAATCCTCCGAACAACAAGTCTTCTTTTCTCAAGGAGTACATAGACGCGCACAACAACATAGGCTTGCTTGAAATAGATCTTGAAAACTTGCACGAGGCGCGGAAGATTTTAACTACTGGATTGGAGATTTGTGATGAAGAGGAGGTCGCTGAATTCGATGATGGCCGCAGTAGGCTCCATCACAACCTTGGGACTGTGTATATGGAACTTAGGCTTTGGGATGAGGCTAGGAAAAACATCAAGAGGGATATTGTGATTTGTAACAGAATTGGACACTGTCAAGGGGAGGCCAAGGGGTATATTAATCTTGGTGAAATGCATTACAGGACTCAGAGGTACGAAGATGCAAGTGCTTATTACGAGAAGGCCCTTGGTTTGGCGAAGTCCTTGGAGGATGAAGATGCTTTGGTTAAGCAAATTCAGCAGAATATTGAAACTGTGAGAGAAGCTGGTAAGGTAATGGCTGATATAACGAAAGAAGAGCAAAGCCTTAAAAAGCTTAAAAGAGATATAGCCGCGGCTAGAGGGACATCAAATGAGCGGAAATTCTTGCTGCAGCAGAATGCAGTTCTTGAACGCCTTGTTGAGAAAGCAAGGATGATCTCTGCGTGGGAGAAGCATTGTGAATATGCAAAGGAGAAGAAGAAAATAGCAAGTGAACTCTGTGATAGGCAGAAGCTAGCTGATTCATATCTGGATATTGCAGAATCATACCAGAAACTCAGAAGATTTAACAAAGCTATCAAATGGTACAAAAAGAGCTGGCAAATGTACAAAAATATTGGTAACTTAGAGGGGCAAGCGCTGGTGAAAATTAACATCGGTAATGTTTTGGATTCTACTAACAATTGGAGAGAAGCATTAGATGCATTTCAAGAGAGCTACAGTATTGCTGTTGAAGCAGACCTGCCTGATGTGCAACTCTCTGCTTTGGAAAATATGCATTATAGCAACATGATAAGATTTGACGATGAGGATGAGACCAGGAGGTTGAAGCTTCTAATTGATAAACTGAAGGAATCCAAAGAAAAGGAGGCAGCAGCAAAAAATATGTCAGAGGATTGTTGCTCTGAAACTGATACTGAAGCAGATGATTATTTGTCAAACAGTGGGTCTGATAATTTTTGCTTTCCAAAGACAATTTCTCAATCAAAAGCTCCAACTACTGGAGATGAATTGGAAGATGACGCACCACTTATGTCCCTCTATCAATCCATAAAAAGCTCATCCAAAAACAAAACAGGCCACAAAGAAAGTCTTCTCAACTCTACCAAGCAAGCAGAGCAGTCACCCAGTAGTCTGAAAAATCAAACCAGTGATCATCAGACAATTGTTAGTCGAAAACGAGTCCGTGTAATTCTTTCTGATGATGATGATGATGAGGTGGAATGTTCAAGCAGAAAGGATCATGATTGCCTGGTAGATGATTTGCCCACTTATAATGCCATTAAGAGAAAAGCCAGTCCTTGTAAAATTCAGGTTATCTCTGAGTATGGATCTAAGGGTGCAATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGTTCAAGTCCACATACAGCCACAAAATCTGGCAGGCATTCTAGGTCTTTGAGTAATGATGTAGTTGCTGAAGCTAATTTCCCTACTGGTTCTAAATGTGACACTGATTTCTCTGGCAAACAAAATGATATTTCCCAGCCCAGGTTGCATCTTTCCCAAAATGACTCCCAGAAATGTATTACATGTCGGATTGGGAATGATCTAATACACGTTGAAGCAACCTTGTGTACCACTGGTGATCAGTTGAACATTGACTCTTTGAAGGCTGTAGTTGCATGCTTATATTATCTACAATTTCTGCCGGAAAAGAGATCAGAGGGTTTGTTGCCCATTATTGAGCATATAAAATGTGCTGGAAGAGATATGGAATCCCTGGAAACTGTTGAACATCTTAAGGAAGTTCTGGGAAATGACATGGTTGAAGCTTCCGTTGATGGATGGATTCACAAGCGCCTGATAAAAATGTACGTAGACTGCTGCAAAGAGTTATCTGAGGTACCAAACATCAAGGTACTGATGAAGCTTTACAATTTAGAGGTTTCAGATGACGAGATTGTTGTGTCTGATTGCGACCTGCAAGATTTGTCAATTACACCATTGATAAATGCACTGCATTCCCAAAAGTCATTTGCAATGCTGGACCTCTCTCACAACTTGTTAGGAAACGGAACAATAGAGAAACTTCAAAAGGTGTTCACAGCATCGGGACAATCTTATGGTGGCTTAACTCTGGATTTGCATTGTAATCGATTTGGCCCAACAACGTTGTTTCAGATTTGCGAGTGTTCACTTCTATTTGCGAGACTAGAAGTTCTTAACATATCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCGACAATTTTAAAAAACTGTACAGCGCTTTGTAGCTTGAATATAGAGAACTGTTCTGTCACATCCAGAACTATTCAAAAGATTGCAGATGCATTGGACTCCAGATCTGTCCTTGCCCATCTATGTATAGGATACAACAGCCCTGTATCTGGAAATGCTACAGTTAATCTTCTGTCCAAGCTTTCTACTCTGAAAAGGTTTTCAGAGTTGAATATGAGTGGTCTAAAACTAAGCAAACCAGTTGTCGATGCCCTTTGCAAGCTTGCAGGGAGCTTAACTTTATCAGGACTACTACTTGGGGGCACGGGTATTGGAACTGAAGGGGCGAATAAATTAGTAGAATCTTTGCTCAAAGGGAATGAAGAGCTTGTGAAACTTGACCTATCATATTGTGGTCTAACATGTAACTTTGTTTTAAACACCAGTGTTAATTTCTTTTGTTCCATCCTAGAGCTAAACCTGGAAGGAAACCCTATCATGGCTGAGGGCAGCGATACTTTATTTTCTCTTCTCGTAAACCCACAGTGCTGTCTCAAAGTTTTGGTTCTTAGAAAGTGTCAACTTGGGCTTACTGGAATCCTTCACATAATTGAGGCTCTGGCAGAGAACAGCTGCATTGAAGAACTTAATATTGCTGATAATTCTGTTCCAAAGGAATGTTCAACTCTACAATATGATTTATCAGTAAAAAGCTGCTCACAAAACCAGGAGCAGAAACTAGATGCTATGCAAGTTGATGATAATCAAGAGGTCCTTTGCTCTTTAAACACACCCAACTATAAGCTGGAAGTTGCTGATAGTGAAGATATTGCACTGGAAGCTGCTGCTTCTGGAATTGACGACAGCTGTGCCAGTTCATGTCAAAGAAATTCATCTCCCGAGTGCCATTTAACGCAACAGTTTTCGATTGCTATTGGTAAGGCAAAGAACTTGCAATTACTAGACCTTAGCAAGAATGGTTTTTCTGCACAAGCTGTGGAAACATTCTATGGCTCGTGGGCGACTTTACGACCCCTTTCAAGTCAGAAGCACATTACTGAGCAGATTGTTCATTTCTCAACGAGGGAAAATAAATGCTGCAGAGTGAAACCTTGCTGCAAGAAAGCTTGA 3957 0.423 MDAELRSAKAAYRNANAEGNHREEARWANVIADIMKKRGDYVIALNWLRIDYEISLKHLPEKHLLPTCQSLGEMYLRLEEFPDALIFQKKHLELARDANDIVEEQRATTQLGRTYHELFSRSDHDHNSIRNAKKYFKCAMDLAVKLKENPPNNKSSFLKEYIDAHNNIGLLEIDLENLHEARKILTTGLEICDEEEVAEFDDGRSRLHHNLGTVYMELRLWDEARKNIKRDIVICNRIGHCQGEAKGYINLGEMHYRTQRYEDASAYYEKALGLAKSLEDEDALVKQIQQNIETVREAGKVMADITKEEQSLKKLKRDIAAARGTSNERKFLLQQNAVLERLVEKARMISAWEKHCEYAKEKKKIASELCDRQKLADSYLDIAESYQKLRRFNKAIKWYKKSWQMYKNIGNLEGQALVKINIGNVLDSTNNWREALDAFQESYSIAVEADLPDVQLSALENMHYSNMIRFDDEDETRRLKLLIDKLKESKEKEAAAKNMSEDCCSETDTEADDYLSNSGSDNFCFPKTISQSKAPTTGDELEDDAPLMSLYQSIKSSSKNKTGHKESLLNSTKQAEQSPSSLKNQTSDHQTIVSRKRVRVILSDDDDDEVECSSRKDHDCLVDDLPTYNAIKRKASPCKIQVISEYGSKGAINVEESSSSFKCSSPHTATKSGRHSRSLSNDVVAEANFPTGSKCDTDFSGKQNDISQPRLHLSQNDSQKCITCRIGNDLIHVEATLCTTGDQLNIDSLKAVVACLYYLQFLPEKRSEGLLPIIEHIKCAGRDMESLETVEHLKEVLGNDMVEASVDGWIHKRLIKMYVDCCKELSEVPNIKVLMKLYNLEVSDDEIVVSDCDLQDLSITPLINALHSQKSFAMLDLSHNLLGNGTIEKLQKVFTASGQSYGGLTLDLHCNRFGPTTLFQICECSLLFARLEVLNISGNRLTDACGSYLSTILKNCTALCSLNIENCSVTSRTIQKIADALDSRSVLAHLCIGYNSPVSGNATVNLLSKLSTLKRFSELNMSGLKLSKPVVDALCKLAGSLTLSGLLLGGTGIGTEGANKLVESLLKGNEELVKLDLSYCGLTCNFVLNTSVNFFCSILELNLEGNPIMAEGSDTLFSLLVNPQCCLKVLVLRKCQLGLTGILHIIEALAENSCIEELNIADNSVPKECSTLQYDLSVKSCSQNQEQKLDAMQVDDNQEVLCSLNTPNYKLEVADSEDIALEAAASGIDDSCASSCQRNSSPECHLTQQFSIAIGKAKNLQLLDLSKNGFSAQAVETFYGSWATLRPLSSQKHITEQIVHFSTRENKCCRVKPCCKKA* 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2778 1318 SUPERFAMILY RNI-like 835 1285 - -
Pvu2g2778 1318 Coils Coil 278 298 - -
Pvu2g2778 1318 SUPERFAMILY TPR-like 17 196 IPR011990 GO:0005515
Pvu2g2778 1318 Gene3D Ribonuclease Inhibitor 820 1299 IPR032675 -
Pvu2g2778 1318 PANTHER PROTEIN TONSOKU 2 1317 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Pvu2g2778 1318 Pfam Tetratricopeptide repeat 205 276 - -
Pvu2g2778 1318 Pfam Tetratricopeptide repeat 376 446 - -
Pvu2g2778 1318 MobiDBLite consensus disorder prediction 659 679 - -
Pvu2g2778 1318 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
Pvu2g2778 1318 SMART tpr_5 65 98 IPR019734 GO:0005515
Pvu2g2778 1318 SMART tpr_5 162 195 IPR019734 GO:0005515
Pvu2g2778 1318 SMART tpr_5 416 449 IPR019734 GO:0005515
Pvu2g2778 1318 SMART tpr_5 205 238 IPR019734 GO:0005515
Pvu2g2778 1318 SMART tpr_5 376 409 IPR019734 GO:0005515
Pvu2g2778 1318 SMART tpr_5 245 278 IPR019734 GO:0005515
Pvu2g2778 1318 MobiDBLite consensus disorder prediction 556 589 - -
Pvu2g2778 1318 SUPERFAMILY TPR-like 161 445 IPR011990 GO:0005515
Pvu2g2778 1318 SMART LRR_RI_2 956 983 - -
Pvu2g2778 1318 SMART LRR_RI_2 928 955 - -
Pvu2g2778 1318 SMART LRR_RI_2 869 896 - -
Pvu2g2778 1318 SMART LRR_RI_2 1095 1122 - -
Pvu2g2778 1318 SMART LRR_RI_2 1040 1067 - -
Pvu2g2778 1318 SMART LRR_RI_2 1124 1151 - -
Pvu2g2778 1318 MobiDBLite consensus disorder prediction 556 591 - -
Pvu2g2778 1318 Gene3D Tetratricopeptide repeat domain 330 506 IPR011990 GO:0005515
Pvu2g2778 1318 ProSiteProfiles TPR repeat profile. 245 278 IPR019734 GO:0005515
Pvu2g2778 1318 Coils Coil 305 325 - -
Pvu2g2778 1318 Gene3D Tetratricopeptide repeat domain 1 329 IPR011990 GO:0005515
Pvu2g2778 1318 Coils Coil 479 499 - -
Pvu2g2778 1318 MobiDBLite consensus disorder prediction 491 512 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2778 - - gmx:100805682 2274.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2778 2 43483450 43496351 Pvu2g2778 2 43483450 43496351 ECH