Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2670 ATGTCAGTGAAATTGATACAATTTGTGAGATGGCTTGTGATTTCAACAACACTAATGCAGAGTACTGTGATTGGTGGAAGAGAAACCAATTTCAGAGCCATTTTCAACTTCGGAGACTCCAATTCTGACACCGGCGGTCTCTCGGCGGCGTTCGGACAAGCTCCTCCTCCCAACGGAATCACTTTTTTCCACTCTCCAAACGGACGATTCTCCGATGGCCGCCTCATAATCGATTTTATAGCCAAGAGCTTCGGCTTGCCTTATCTGAATGCTTACTTGGACTCGGTGGGGTCCAATTTCAGCCACGGAGCGAATTTCGCCACCGCCGGATCCACCGTCAGACCTCAGAACACAACCAAGTCTCAGAGCGGATACAGTCCCATTTCCCTAGATGTGCAGTTCCAGCAATTCCGTGATTTCAAAACCAGGTCCAAATTCGTCCGCGAACGAGGAGGGGTGTTTAAGGAGTTATTGCCCAAGGAGGAGTATTTTTCTGGGGCTCTATATACCTTTGATATTGGCCAAAATGATCTCACAGCTGGCTACAAACTCAACTTCACCACAGAACAAGTCAAGGCCTATATTCCTGATGTATTGGGCCAGTTCTCCAGAGTTATAAAGGGTGTGCATGGGGAAGGTGGAAGGACATTTTGGATACACAACACAGGCCCTTTGGGATGCTTGCCATACATGCTGGATCGCTATCCCATGAGCCCAGCCCAAATGGACGAGTTTGGGTGTGCCAAACCATTCAATGAGGTGGCCCAATATTTTAATAAAAGATTAAAAGAAAGTGTTGAGAAACTGAGGGAAGAATTGCCAGATGCTAAAATCACCTATGTTGATGTGTATAGGGTAAAGTACAGGCTCATCAGCCATGCCCAGAAATATGGTTTTGAGAAGGGGTTGATAGCATGCTGTGGACACGGTGGGAAATACAACTTCAATAATAGAGAGAGATGTGGAGCAAGCAAGCGAATGAATGGGAGAGAGGTTGTGATAGCCAAAGCTTGCAAAGATGCAAGTGTGAGGATCATCTGGGATGGTATCCATTACACCGAAGCTGCCAATAATTGGATCTTCCTGCAAATACTCAACGGCTCGTTTTCAGATCCACCTACGTCATTAGGAGATACAAATTCACGTTCTTGA 1152 0.4618 MSVKLIQFVRWLVISTTLMQSTVIGGRETNFRAIFNFGDSNSDTGGLSAAFGQAPPPNGITFFHSPNGRFSDGRLIIDFIAKSFGLPYLNAYLDSVGSNFSHGANFATAGSTVRPQNTTKSQSGYSPISLDVQFQQFRDFKTRSKFVRERGGVFKELLPKEEYFSGALYTFDIGQNDLTAGYKLNFTTEQVKAYIPDVLGQFSRVIKGVHGEGGRTFWIHNTGPLGCLPYMLDRYPMSPAQMDEFGCAKPFNEVAQYFNKRLKESVEKLREELPDAKITYVDVYRVKYRLISHAQKYGFEKGLIACCGHGGKYNFNNRERCGASKRMNGREVVIAKACKDASVRIIWDGIHYTEAANNWIFLQILNGSFSDPPTSLGDTNSRS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2670 383 CDD SGNH_plant_lipase_like 33 368 IPR035669 -
Pvu2g2670 383 Coils Coil 259 279 - -
Pvu2g2670 383 PANTHER BNAA06G32900D PROTEIN 27 376 - -
Pvu2g2670 383 Pfam GDSL-like Lipase/Acylhydrolase 34 361 IPR001087 GO:0016788
Pvu2g2670 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 27 376 - -
Pvu2g2670 383 Gene3D SGNH hydrolase 26 368 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2670 Pvu-Chr2 42537855 42540229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2670 33 376 Acyl Lipid Metabolism Gene Families AT4G10950 30.000 2.84e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2670 - - var:108335696 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2670 2 42537855 42540229 Pvu2g2670 2 42537855 42540229 ECH