Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2610 ATGGACCCCTCTACTTCTCGACCAGCTGTAGTAATCGATAATGGCTCCGGGTATACGAAGATGGGGTTTGCTGGTAATGTTGAACCATCCTTTATTGTTCCGACTGTTGTTGCAGTTAATGAGTCGTTTCTGACTCAATCCAGGGGTTCTTCTAAAGGCAATTGGGCGGCCCAGCACAATGCTGGGGTTTTGGCAGATCTTGATTTCTTCATTGGGGATGAGGCACTTTCCAAGTCTCGATCTAGCAGCACTTACAATCTCAGCTACCCGATTCGGCATGGTCAGGTTGAGAATTGGGATGCCATGGAGCGCTTCTGGCAGCAGTGCATATTCAACTACTTGAGGTGTGATCCGGAGGATCACTATTTCCTCTTGACCGAGAGTCCATTGACCGCACCTGAGAGTCGCGAGTATACTGGGGAAATCATGTTTGAGACTTTTAACGTGCCTGGACTTTACATTGCTGTGAATTCTGTGCTTGCTCTTGCAGCTGGGTACACAACATCTAAGTGTGAGATGACAGGAGTTGTAGTGGATGTTGGAGATGGGGCAACTCATGTTGTACCTGTGGCAGATGGCTACGTTATTGGTAGCAGCATCAAATCGATTCCTATTGCTGGAAAGGATGTTACTCTTTTTGTTCAGCAGCTTATGCGGGAAAGAGGAGAGAAGGTACCACCGGAAGACTCTTTTGAAGTGGCATGGAAAGTAAAGGAAATGTATTGCTACACCTGCTCTGACATTGTGAAGGAATTCAATAAGCACGACAAAGAACCAGGCAAGTACATCAAGCACTGGAGAGGCATTAAACCAAAGACAGGGGCACCATATTCATGTGATATTGGCTATGAACGATTTCTTGGTCCTGAGATTTTTTTCAGTCCTGAGATATATGGCAATGACTTTACGACTCCTTTGCCAGTTGTAATAGACAAGTGTATTCAGTCTGCACCAATTGACACAAGGAGATCCTTATATAAGAATATAGTGTTGTCTGGAGGTTCAACCATGTTCAAGGATTTTCATAGGAGGTTGCAACGTGATCTTAAAAAAATAGTGGATGCTCGTGTCCTTTTATCCGAAGCACGCTTAAACGGGGAGATAAAATCACAGCCAGTGGAGGTAAATGTACTCGGCCATCCAATCCAGAGATTTGCAGTTTGGTTTGGAGGATCAGTACTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACGAAGGCAGAATATGAGGAGTATGGAGCAAGCATTTGCCGTACAAATCCCGTTTTCAAGGGGATGTATTAA 1287 0.4468 MDPSTSRPAVVIDNGSGYTKMGFAGNVEPSFIVPTVVAVNESFLTQSRGSSKGNWAAQHNAGVLADLDFFIGDEALSKSRSSSTYNLSYPIRHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVADGYVIGSSIKSIPIAGKDVTLFVQQLMRERGEKVPPEDSFEVAWKVKEMYCYTCSDIVKEFNKHDKEPGKYIKHWRGIKPKTGAPYSCDIGYERFLGPEIFFSPEIYGNDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLLSEARLNGEIKSQPVEVNVLGHPIQRFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMY* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2610 428 SMART actin_3 7 423 IPR004000 -
Pvu2g2610 428 Gene3D Actin; Chain A, domain 4 205 303 - -
Pvu2g2610 428 CDD NBD_sugar-kinase_HSP70_actin 10 206 - -
Pvu2g2610 428 PANTHER ACTIN-RELATED PROTEIN 3-LIKE 7 421 - -
Pvu2g2610 428 Gene3D - 158 386 - -
Pvu2g2610 428 Gene3D - 10 414 - -
Pvu2g2610 428 SUPERFAMILY Actin-like ATPase domain 173 423 IPR043129 -
Pvu2g2610 428 Pfam Actin 7 419 IPR004000 -
Pvu2g2610 428 PANTHER ACTIN 7 421 IPR004000 -
Pvu2g2610 428 SUPERFAMILY Actin-like ATPase domain 7 177 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2610 Pvu-Chr2 42004770 42011952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2610 9 417 Miscellaneous Gene Families AT2G42100 33.985 1.23e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2610 K18584 - gmx:100780462 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2610 2 42004770 42011952 Pvu2g2610 2 42004770 42011952 ECH