Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2233 ATGTCTATAACCCAAAACCTCGCTACTTCACTCTCTTCTACTTCTTCTGCTTTCTTAGCTCCCTCTTCCTTCAATTCTAGGGGACACGTTTCATTGCCTGTGAAGAGCGTGGGCATTTGCAAATGCATTGCGACACCCGAGGCTGAGACCGGGTACAAGACAAGGGTCACTCGCAATCCAAATATGGGGAAACTTCAAGCTGGCTATCTATTTCCTGAGATTGCTAGAAGAAGGTCTGCACACTTGCTGAAGTACCCTGATGCTAAAGTTATAAGCCTTGGAATTGGTGACACTACCGAACCTATTCCTGAAGTCATATCTGATGCACTGTCAAAGAGATCACAAGCATTGTCAACTATTGAAGGATATAGTGGGTATGGAGCTGAACAAGGTGAAAAGCCATTAAGAAGTGCAATTGCTTCAACATTTTACAGCGATCTTGGCATAGAAGAGGATGATATATTTGTATCAGATGGAGCAAAGTGTGATATATCTCGTCTCCAGATTGTCTTCGGTTCAAATGTAAAATTGGCTGTACAAGACCCTTCATACCCGGCCTATGTAGACTCAAGTGTAATTATGGGCCAGACTGGCCTCTACCAGAAGGATGTTGAGAAGTTTGCAAACATTGAATACATGAGGTGTAGTCCGGAAAATGGTTTCTTCCCTGATTTATCTTCAATTTCTCGACCAGACATCATATTTTTTTGTTCGCCAAACAATCCTACTGGTGCTGCAGCAACAAGGGAACAACTGACCCAACTAGTTAAGTATGCTAAGGACAACGGTTCTATAGTAATCCATGATTCAGCTTATGCAATGTATATTTCTGGTGACAACCCACGTTCCATCTTTGAAATTCCTGGAGCCAAGGAGGTTGCCATTGAAACTTCATCATTTAGCAAGTATGCTGGGTTCACTGGAGTCCGATTAGGTTGGACTGCGATTCCAAAGCAGTTGCTGTTTTCTGATGGATTTCCTGTTGCCAGGGACTTCAACCGAATTGTATCCACTTGTTTCAATGGTGCATCAAATATTTCCCAGGCAGGTGGTTTGGCTTGTCTTTCACCAGAAGGTCTTAAGGCTATGCGAGGTGTTATTGGATTCTACAAAGAAAACACCAACATAATTATGGAGACATTTGATTCTCTTGGGTTTAAAGTCTATGGAGGGAAAGATGCACCATATGTGTGGGTTCATTTCCCTGGCCAAAGCTCATGGGATGTATTCGCAGAGATTCTTGAGAAGACTCATGTGGTTACAACTCCTGGTAGTGGTTTTGGACCCGGTGGTGAAGGTTTTGTCAGGGTTAGTGCCTTTGGTCACAGGGAAAACGTCTTGGAGGCATGCAGAAGGTTCAAGCAGCTATACAACTGA 1377 0.4336 MSITQNLATSLSSTSSAFLAPSSFNSRGHVSLPVKSVGICKCIATPEAETGYKTRVTRNPNMGKLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVISDALSKRSQALSTIEGYSGYGAEQGEKPLRSAIASTFYSDLGIEEDDIFVSDGAKCDISRLQIVFGSNVKLAVQDPSYPAYVDSSVIMGQTGLYQKDVEKFANIEYMRCSPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTQLVKYAKDNGSIVIHDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTAIPKQLLFSDGFPVARDFNRIVSTCFNGASNISQAGGLACLSPEGLKAMRGVIGFYKENTNIIMETFDSLGFKVYGGKDAPYVWVHFPGQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKQLYN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2233 458 CDD AAT_like 91 455 - -
Pvu2g2233 458 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 57 455 IPR019942 GO:0008483
Pvu2g2233 458 Pfam Aminotransferase class I and II 89 453 IPR004839 GO:0009058|GO:0030170
Pvu2g2233 458 PANTHER AMINOTRANSFERASE 9 458 IPR019942 GO:0008483
Pvu2g2233 458 SUPERFAMILY PLP-dependent transferases 69 453 IPR015424 -
Pvu2g2233 458 Gene3D Aspartate Aminotransferase, domain 1 70 454 IPR015422 GO:0003824
Pvu2g2233 458 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 9 458 - -
Pvu2g2233 458 Gene3D - 100 357 IPR015421 GO:0003824
Pvu2g2233 458 Hamap LL-diaminopimelate aminotransferase [dapL]. 57 456 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2233 Pvu-Chr2 37966682 37973155 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2233 K10206 - gmx:100801405 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2233 2 37966682 37973155 Pvu2g2233 2 37966682 37973155 ECH