Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2227 ATGGCTTCCTCGGAGATCGAGGTGGTATCATCATCATCATCGGTCTCCAAATCCAACGACCAGCCTGTTATCCTCGACGTCTTCACCGCCTCTGCTCACGGCGACTTCAATAAATTGAGAACCTTCGTCGAACAATACGGGGCCTCCGTCTCCGTTCCCGATATTAGTGGTTATTACGCTCTTCAATGGGCCTCGCTTAACAACTTTCACGACATTGCGCACTATCTCATTCAGCATGGAGCGGATGTGAATGCTAAAGACAACATGCAACAAACAGCATTGCATTGGGCAGCTGTTCGAGGTTCAACTGCAGCTGCTGATGTGCTTGTGGAGAATGGTGCTCGGATTGAAGCTGCAGACCTAAATGGATACCGGGCAGTTCATGTTGCTGCACAATATGGACAAACAGCTTTCTTAAATCACATTGTAGTAAAGCACCATGCCGATTTTGATGTGCCTGATAATGATGGCAGGAGTCCTCTTCACTGGGCCGCATATAAGGGATTTGCTGACACAATAAGATTGCTTCTATTTAGAGATGCATGCCAAGGAAGACAAGATAAAGATGGTTGTACACCGTTGCACTGGGCTGCATTAAGAGGAAATGCAGAGGCATGCGCTGTGCTTGTACATGCAGGCACAAAGGAAGAATTGACGGTGAAGGACAATGCTGGACACACACCTGTACAACTTGCATATGATAAAGGTCATCGACATGTCGCTCCTTTCCTTTCAAATCAACAACGGGCTCGTAGCAACTTCTGGAAAGGGAAACTTTGTAGTGGGGTGGTGACAGATATTGGTTATGCTCCCATCTTATTGTGTATTATGATCTTTCTCATGATCCTCTTCATCAACTCAGTTATCGTTGCTCCTAACCTTGGAAAGATTACTGCTTTTGCTGGACTTTGGGCATGGACAGCACTTTCTCTAGAAGCTGCTGCCCTGATTATGTTCTATAGGTGTAGTAGCAAAGATCCTGGTTATATAAAACGGCTGGGAGACTTGGGTACTCAAAGTGATACAGAGGATCCTTTATTGAATATTGATCTGAATAGTTCCTCTGTTTGGATGGGGAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCTACTTGTAAGCGATGTGTGGAACAGTTCGACCACCACTGTCCATGGATATCTAACTGTGTTGGGAAGAGGAACAAAAGAGATTTCTTTATTTTTATCTGCCTGGGAACTTTGACTTCTTCCGTTTCTGCTGCCGTTGCAGTTCAAAGAATTTGGACATCTAGACCAACATTACTGGCAGGAGAAACATGGATCCAGTATGTGGTAGTAAGACATCCAGGTTTAGTTGTGTTTTTGGTGATGGACGCAGTTGTTTTCATTGCAGCTACAACATTGACAATAACGCAGATTTCCATGATTGCTCGAAATGTGACCACAAATGAACTAGCAAATTCTTCCCGCTATGATTATCTTCGTGGTCCTGATGGGCGGTTCAGAAACCCATATAACCATGGTTGTCGGAAGAATTGTGCTGATTTCCTTTCTCTGGGATATACAAATGATGATGAAATTGCTTGGCCTCGATTACAGCAGGTGGCAACTTGA 1623 0.4455 MASSEIEVVSSSSSVSKSNDQPVILDVFTASAHGDFNKLRTFVEQYGASVSVPDISGYYALQWASLNNFHDIAHYLIQHGADVNAKDNMQQTALHWAAVRGSTAAADVLVENGARIEAADLNGYRAVHVAAQYGQTAFLNHIVVKHHADFDVPDNDGRSPLHWAAYKGFADTIRLLLFRDACQGRQDKDGCTPLHWAALRGNAEACAVLVHAGTKEELTVKDNAGHTPVQLAYDKGHRHVAPFLSNQQRARSNFWKGKLCSGVVTDIGYAPILLCIMIFLMILFINSVIVAPNLGKITAFAGLWAWTALSLEAAALIMFYRCSSKDPGYIKRLGDLGTQSDTEDPLLNIDLNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTLTSSVSAAVAVQRIWTSRPTLLAGETWIQYVVVRHPGLVVFLVMDAVVFIAATTLTITQISMIARNVTTNELANSSRYDYLRGPDGRFRNPYNHGCRKNCADFLSLGYTNDDEIAWPRLQQVAT* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Pvu2g2227 540 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 530 - -
Pvu2g2227 540 SMART ANK_2a 89 118 IPR002110 GO:0005515
Pvu2g2227 540 SMART ANK_2a 56 85 IPR002110 GO:0005515
Pvu2g2227 540 SMART ANK_2a 189 220 IPR002110 GO:0005515
Pvu2g2227 540 SMART ANK_2a 156 185 IPR002110 GO:0005515
Pvu2g2227 540 SMART ANK_2a 122 152 IPR002110 GO:0005515
Pvu2g2227 540 SMART ANK_2a 224 253 IPR002110 GO:0005515
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Pvu2g2227 540 Pfam DHHC palmitoyltransferase 363 490 IPR001594 GO:0016409
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Pvu2g2227 540 ProSiteProfiles DHHC domain profile. 363 413 - -
Pvu2g2227 540 PANTHER - 3 530 - -
Pvu2g2227 540 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Pvu2g2227 540 Pfam Ankyrin repeats (many copies) 186 232 IPR002110 GO:0005515
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Pvu2g2227 540 Pfam Ankyrin repeats (3 copies) 120 181 IPR002110 GO:0005515
Pvu2g2227 540 Pfam Ankyrin repeats (3 copies) 30 119 IPR002110 GO:0005515
Pvu2g2227 540 Gene3D - 14 142 IPR036770 -
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Pvu2g2227 540 Gene3D - 143 255 IPR036770 -
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Pvu2g2227 540 ProSiteProfiles Ankyrin repeat region circular profile. 56 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2227 Pvu-Chr2 37897486 37910545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2227 7 236 Miscellaneous Gene Families AT1G05640 26.860 1.13e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2227 K20032 - gmx:100807263 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2227 2 37897486 37910545 Pvu2g2227 2 37897486 37910545 ECH